Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 18 studies | 38% ± 13% | |
epithelial cell | 7 studies | 36% ± 16% | |
type I pneumocyte | 6 studies | 21% ± 3% | |
goblet cell | 6 studies | 29% ± 8% | |
basal cell | 5 studies | 28% ± 12% | |
enterocyte | 5 studies | 23% ± 4% | |
respiratory goblet cell | 4 studies | 22% ± 2% | |
secretory cell | 4 studies | 27% ± 7% | |
club cell | 4 studies | 22% ± 1% | |
type II pneumocyte | 3 studies | 20% ± 3% | |
brush cell | 3 studies | 21% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
pancreas | 100% | 3774.17 | 328 / 328 | 97% | 127.65 | 173 / 178 |
thymus | 100% | 4868.26 | 653 / 653 | 95% | 143.72 | 577 / 605 |
prostate | 95% | 3735.54 | 233 / 245 | 100% | 187.15 | 500 / 502 |
lung | 96% | 1879.39 | 554 / 578 | 92% | 87.48 | 1063 / 1155 |
stomach | 78% | 3321.14 | 281 / 359 | 95% | 87.16 | 273 / 286 |
breast | 66% | 1872.46 | 305 / 459 | 94% | 134.38 | 1047 / 1118 |
intestine | 55% | 3330.23 | 536 / 966 | 97% | 107.08 | 513 / 527 |
bladder | 62% | 2301.90 | 13 / 21 | 90% | 110.56 | 453 / 504 |
kidney | 100% | 3435.78 | 89 / 89 | 48% | 38.84 | 432 / 901 |
esophagus | 47% | 733.62 | 679 / 1445 | 80% | 59.84 | 147 / 183 |
uterus | 49% | 462.59 | 84 / 170 | 78% | 66.35 | 357 / 459 |
ovary | 10% | 58.63 | 18 / 180 | 98% | 135.38 | 421 / 430 |
ureter | 0% | 0 | 0 / 0 | 100% | 21.92 | 1 / 1 |
tonsil | 0% | 0 | 0 / 0 | 67% | 38.20 | 30 / 45 |
skin | 53% | 446.81 | 966 / 1809 | 1% | 0.27 | 3 / 472 |
liver | 19% | 145.46 | 43 / 226 | 21% | 34.71 | 86 / 406 |
heart | 38% | 236.85 | 330 / 861 | 0% | 0 | 0 / 0 |
adipose | 27% | 162.80 | 324 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 13% | 76.40 | 124 / 929 | 0% | 0 | 0 / 0 |
blood vessel | 5% | 28.73 | 73 / 1335 | 0% | 0 | 0 / 0 |
adrenal gland | 1% | 7.24 | 3 / 258 | 2% | 0.76 | 4 / 230 |
brain | 2% | 10.13 | 49 / 2642 | 0% | 0.05 | 1 / 705 |
eye | 0% | 0 | 0 / 0 | 1% | 0.34 | 1 / 80 |
spleen | 1% | 6.08 | 2 / 241 | 0% | 0 | 0 / 0 |
muscle | 0% | 2.15 | 4 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0034220 | Biological process | monoatomic ion transmembrane transport |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005886 | Cellular component | plasma membrane |
GO_0008381 | Molecular function | mechanosensitive monoatomic ion channel activity |
Gene name | TMC4 |
Protein name | Transmembrane channel-like protein Transmembrane channel like 4 Transmembrane channel-like protein 4 Transmembrane channel like 4 (Transmembrane channel-like protein 4) |
Synonyms | |
Description | FUNCTION: Probable ion channel. . |
Accessions | ENST00000621826.1 ENST00000615945.4 ENST00000612564.4 A0A087WT65 ENST00000616977.4 ENST00000621539.1 ENST00000618950.4 [Q7Z404-2] A0A087WVI4 ENST00000619470.1 [Q7Z404-2] A0A087WXY6 Q7Z404 ENST00000446291.1 C9JFU4 A0A0G2JNC6 ENST00000619510.4 A0A0G2JPL6 ENST00000610383.1 A0A0G2JP95 ENST00000621671.4 [Q7Z404-1] A0A0G2JMP8 ENST00000619895.5 A0A0G2JMM6 ENST00000617472.4 ENST00000612712.1 [Q7Z404-2] ENST00000616323.1 [Q7Z404-2] ENST00000622368.1 [Q7Z404-2] ENST00000613354.1 [Q7Z404-2] ENST00000620520.1 [Q7Z404-2] |