Name | Number of supported studies | Average coverage | |
---|---|---|---|
cholangiocyte | 5 studies | 70% ± 25% | |
enterocyte | 5 studies | 25% ± 8% | |
hepatocyte | 5 studies | 56% ± 24% | |
pancreatic A cell | 4 studies | 75% ± 15% | |
enteroendocrine cell | 3 studies | 31% ± 8% | |
abnormal cell | 3 studies | 32% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 7045.18 | 226 / 226 | 98% | 1147.93 | 399 / 406 |
pancreas | 100% | 1647.21 | 328 / 328 | 89% | 542.64 | 158 / 178 |
stomach | 99% | 271.88 | 355 / 359 | 28% | 34.25 | 80 / 286 |
intestine | 81% | 459.55 | 787 / 966 | 27% | 62.43 | 144 / 527 |
esophagus | 43% | 30.30 | 615 / 1445 | 30% | 31.93 | 54 / 183 |
lung | 52% | 26.17 | 302 / 578 | 17% | 46.74 | 201 / 1155 |
thymus | 38% | 11.21 | 248 / 653 | 30% | 10.23 | 179 / 605 |
kidney | 55% | 25.18 | 49 / 89 | 9% | 9.35 | 77 / 901 |
breast | 45% | 16.49 | 206 / 459 | 1% | 0.22 | 7 / 1118 |
adipose | 34% | 10.64 | 409 / 1204 | 0% | 0 | 0 / 0 |
adrenal gland | 21% | 6.26 | 54 / 258 | 10% | 7.30 | 24 / 230 |
uterus | 18% | 3.84 | 30 / 170 | 7% | 12.46 | 31 / 459 |
bladder | 5% | 0.81 | 1 / 21 | 7% | 9.10 | 33 / 504 |
ovary | 3% | 1.74 | 6 / 180 | 3% | 1.34 | 15 / 430 |
blood vessel | 6% | 1.75 | 85 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 5% | 4.52 | 43 / 929 | 0% | 0 | 0 / 0 |
prostate | 2% | 0.61 | 6 / 245 | 0% | 0 | 0 / 502 |
skin | 2% | 0.90 | 39 / 1809 | 0% | 0.02 | 1 / 472 |
brain | 1% | 0.24 | 24 / 2642 | 0% | 0 | 0 / 705 |
spleen | 1% | 9.27 | 2 / 241 | 0% | 0 | 0 / 0 |
heart | 0% | 0.25 | 4 / 861 | 0% | 0 | 0 / 0 |
muscle | 0% | 0.07 | 2 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0042246 | Biological process | tissue regeneration |
GO_0016020 | Cellular component | membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | TM4SF4 |
Protein name | Transmembrane 4 L6 family member 4 (Intestine and liver tetraspan membrane protein) (IL-TMP) Transmembrane 4 L six family member 4 |
Synonyms | ILTMP |
Description | FUNCTION: Regulates the adhesive and proliferative status of intestinal epithelial cells. Can mediate density-dependent cell proliferation. |
Accessions | C9JVD2 P48230 ENST00000465758.1 ENST00000305354.5 |