TLCD5 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
retinal rod cell	5 studies	23% ± 6%	Explore
retinal cone cell	3 studies	29% ± 9%	Explore
astrocyte	3 studies	20% ± 4%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	1944.98	2642 / 2642	100%	29.57	703 / 705
prostate	100%	1308.40	245 / 245	99%	13.54	499 / 502
ovary	100%	1538.22	180 / 180	99%	8.03	426 / 430
kidney	100%	775.75	89 / 89	98%	8.87	882 / 901
adrenal gland	100%	2416.86	258 / 258	97%	9.95	224 / 230
breast	99%	833.23	455 / 459	97%	7.13	1087 / 1118
thymus	100%	1512.57	653 / 653	96%	10.54	578 / 605
pancreas	94%	456.64	307 / 328	94%	5.61	167 / 178
lung	100%	1083.36	576 / 578	84%	4.81	974 / 1155
uterus	100%	1692.48	170 / 170	70%	5.00	320 / 459
skin	80%	600.24	1443 / 1809	83%	6.14	390 / 472
bladder	100%	886.24	21 / 21	54%	2.69	272 / 504
esophagus	87%	641.04	1255 / 1445	45%	1.67	82 / 183
intestine	88%	567.94	854 / 966	32%	1.14	168 / 527
stomach	83%	431.37	298 / 359	32%	1.05	92 / 286
ureter	0%	0	0 / 0	100%	2.64	1 / 1
blood vessel	100%	1357.45	1333 / 1335	0%	0	0 / 0
heart	100%	1338.47	858 / 861	0%	0	0 / 0
spleen	100%	673.83	240 / 241	0%	0	0 / 0
adipose	98%	699.87	1179 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	83%	5.28	66 / 80
liver	5%	15.38	11 / 226	44%	2.31	178 / 406
lymph node	0%	0	0 / 0	31%	1.64	9 / 29
tonsil	0%	0	0 / 0	27%	1.12	12 / 45
muscle	21%	88.53	170 / 803	0%	0	0 / 0
peripheral blood	9%	38.94	81 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0