Name | Number of supported studies | Average coverage | |
---|---|---|---|
T cell | 6 studies | 27% ± 9% | |
plasmablast | 5 studies | 39% ± 17% | |
transit amplifying cell | 5 studies | 38% ± 14% | |
B cell | 4 studies | 28% ± 10% | |
epithelial cell | 4 studies | 25% ± 8% | |
erythrocyte | 4 studies | 29% ± 14% | |
CD4-positive, alpha-beta T cell | 4 studies | 35% ± 8% | |
CD8-positive, alpha-beta T cell | 4 studies | 32% ± 6% | |
erythroblast | 3 studies | 40% ± 20% | |
natural killer cell | 3 studies | 32% ± 11% | |
effector CD8-positive, alpha-beta T cell | 3 studies | 24% ± 6% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
liver | 3 studies | 35% ± 22% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1179.97 | 1438 / 1445 | 99% | 170.74 | 182 / 183 |
lung | 99% | 730.65 | 573 / 578 | 92% | 159.80 | 1064 / 1155 |
stomach | 89% | 766.16 | 321 / 359 | 98% | 137.55 | 279 / 286 |
skin | 92% | 1996.53 | 1671 / 1809 | 94% | 111.35 | 446 / 472 |
intestine | 89% | 730.13 | 855 / 966 | 97% | 155.19 | 513 / 527 |
breast | 84% | 310.08 | 385 / 459 | 95% | 133.04 | 1063 / 1118 |
pancreas | 94% | 232.54 | 307 / 328 | 84% | 71.12 | 150 / 178 |
liver | 94% | 409.81 | 213 / 226 | 66% | 56.10 | 269 / 406 |
kidney | 100% | 721.13 | 89 / 89 | 57% | 35.52 | 518 / 901 |
bladder | 57% | 154.48 | 12 / 21 | 95% | 171.89 | 480 / 504 |
uterus | 44% | 108.26 | 75 / 170 | 99% | 278.49 | 456 / 459 |
prostate | 86% | 291.19 | 211 / 245 | 42% | 22.77 | 213 / 502 |
ovary | 22% | 64.18 | 39 / 180 | 97% | 130.79 | 415 / 430 |
lymph node | 0% | 0 | 0 / 0 | 100% | 249.80 | 29 / 29 |
tonsil | 0% | 0 | 0 / 0 | 100% | 375.38 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 94.11 | 1 / 1 |
spleen | 99% | 901.20 | 238 / 241 | 0% | 0 | 0 / 0 |
thymus | 59% | 135.46 | 386 / 653 | 30% | 26.43 | 184 / 605 |
peripheral blood | 89% | 1535.65 | 827 / 929 | 0% | 0 | 0 / 0 |
brain | 45% | 131.34 | 1201 / 2642 | 29% | 16.09 | 201 / 705 |
adrenal gland | 55% | 170.49 | 141 / 258 | 13% | 9.91 | 29 / 230 |
adipose | 62% | 191.18 | 752 / 1204 | 0% | 0 | 0 / 0 |
muscle | 58% | 118.15 | 466 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 55% | 142.10 | 733 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 45% | 19.12 | 36 / 80 |
heart | 30% | 68.28 | 256 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006139 | Biological process | nucleobase-containing compound metabolic process |
GO_0046105 | Biological process | thymidine biosynthetic process |
GO_0046104 | Biological process | thymidine metabolic process |
GO_0009157 | Biological process | deoxyribonucleoside monophosphate biosynthetic process |
GO_0051289 | Biological process | protein homotetramerization |
GO_1904860 | Biological process | DNA synthesis involved in mitotic DNA replication |
GO_0005829 | Cellular component | cytosol |
GO_0005634 | Cellular component | nucleus |
GO_0004797 | Molecular function | thymidine kinase activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0008270 | Molecular function | zinc ion binding |
GO_0005524 | Molecular function | ATP binding |
Gene name | TK1 |
Protein name | Thymidine kinase, cytosolic (EC 2.7.1.21) Thymidine kinase (EC 2.7.1.21) |
Synonyms | |
Description | FUNCTION: Cell-cycle-regulated enzyme of importance in nucleotide metabolism . Catalyzes the first enzymatic step in the salvage pathway converting thymidine into thymidine monophosphate . Transcriptional regulation limits expression to the S phase of the cell cycle and transient expression coincides with the oscillation in the intracellular dTTP concentration (Probable). Also important for the activation of anticancer and antiviral nucleoside analog prodrugs such as 1-b-d-arabinofuranosylcytosine (AraC) and 3c-azido-3c-deoxythymidine (AZT) . . |
Accessions | ENST00000301634.12 K7ERV3 ENST00000590862.5 ENST00000588734.5 B5BU32 B5BUF9 ENST00000590430.5 ENST00000586613.1 K7ERJ1 K7ENW5 K7ES52 P04183 |