TGDS report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
epithelial cell	3 studies	20% ± 4%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	518.12	1445 / 1445	100%	19.29	183 / 183
ovary	100%	737.69	180 / 180	100%	18.32	430 / 430
stomach	100%	497.85	359 / 359	100%	26.04	285 / 286
breast	100%	760.30	459 / 459	100%	15.77	1114 / 1118
brain	100%	355.56	2630 / 2642	100%	12.69	704 / 705
lung	99%	530.36	574 / 578	100%	19.00	1154 / 1155
thymus	100%	844.54	653 / 653	99%	21.49	600 / 605
intestine	100%	604.84	966 / 966	99%	27.10	522 / 527
prostate	100%	665.62	245 / 245	99%	13.24	497 / 502
pancreas	100%	523.16	328 / 328	99%	16.13	176 / 178
bladder	100%	635.71	21 / 21	99%	18.68	498 / 504
uterus	100%	642.84	170 / 170	98%	17.01	452 / 459
kidney	100%	607.70	89 / 89	98%	14.78	887 / 901
liver	100%	1197.66	226 / 226	97%	13.89	393 / 406
skin	100%	579.95	1808 / 1809	97%	36.14	456 / 472
adrenal gland	100%	740.65	258 / 258	96%	10.05	221 / 230
adipose	100%	775.57	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	17.53	29 / 29
spleen	100%	742.46	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	11.63	45 / 45
blood vessel	100%	516.38	1333 / 1335	0%	0	0 / 0
heart	98%	312.95	842 / 861	0%	0	0 / 0
muscle	94%	210.51	757 / 803	0%	0	0 / 0
eye	0%	0	0 / 0	74%	7.97	59 / 80
peripheral blood	67%	448.64	619 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1