TDRP report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell	13 studies	28% ± 11%	Explore
ciliated cell	5 studies	25% ± 9%	Explore
endothelial cell of lymphatic vessel	5 studies	24% ± 6%	Explore
interneuron	4 studies	33% ± 21%	Explore
retinal pigment epithelial cell	4 studies	22% ± 3%	Explore
GABAergic neuron	4 studies	39% ± 15%	Explore
astrocyte	4 studies	30% ± 6%	Explore
epithelial cell	4 studies	26% ± 5%	Explore
capillary endothelial cell	3 studies	19% ± 1%	Explore
glutamatergic neuron	3 studies	54% ± 7%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	5 studies	31% ± 13%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	100%	2696.12	245 / 245	100%	33.36	501 / 502
brain	100%	1872.62	2638 / 2642	100%	25.21	702 / 705
thymus	100%	4273.33	653 / 653	99%	50.74	600 / 605
kidney	100%	2454.36	89 / 89	98%	24.89	883 / 901
adrenal gland	100%	1668.77	258 / 258	88%	17.95	203 / 230
lung	100%	1618.81	577 / 578	79%	18.08	918 / 1155
breast	100%	1571.15	459 / 459	74%	12.82	832 / 1118
pancreas	100%	826.09	327 / 328	68%	8.64	121 / 178
ovary	100%	3068.83	180 / 180	66%	7.66	285 / 430
liver	100%	1392.25	226 / 226	61%	8.81	248 / 406
bladder	100%	1737.43	21 / 21	52%	8.98	263 / 504
uterus	100%	2002.35	170 / 170	48%	8.59	221 / 459
esophagus	98%	970.91	1414 / 1445	35%	5.83	64 / 183
skin	76%	411.99	1382 / 1809	46%	5.84	217 / 472
stomach	97%	849.70	350 / 359	12%	1.17	35 / 286
intestine	93%	943.17	902 / 966	14%	1.65	73 / 527
adipose	99%	1189.66	1195 / 1204	0%	0	0 / 0
spleen	98%	681.15	236 / 241	0%	0	0 / 0
eye	0%	0	0 / 0	83%	9.94	66 / 80
heart	76%	417.97	655 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	69%	17.51	31 / 45
blood vessel	69%	385.96	918 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	10%	0.59	3 / 29
muscle	10%	38.69	79 / 803	0%	0	0 / 0
peripheral blood	1%	1.92	5 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1