Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 3 studies | 28% ± 6% | |
ciliated cell | 3 studies | 20% ± 5% | |
GABAergic neuron | 3 studies | 26% ± 6% | |
glutamatergic neuron | 3 studies | 38% ± 11% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 28% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
skin | 100% | 681.49 | 1809 / 1809 | 100% | 49.70 | 472 / 472 |
ovary | 100% | 386.43 | 180 / 180 | 100% | 8.98 | 429 / 430 |
stomach | 100% | 381.19 | 359 / 359 | 100% | 6.73 | 285 / 286 |
prostate | 100% | 664.99 | 245 / 245 | 100% | 6.69 | 500 / 502 |
uterus | 100% | 463.69 | 170 / 170 | 100% | 9.44 | 457 / 459 |
breast | 100% | 558.44 | 459 / 459 | 100% | 8.22 | 1113 / 1118 |
bladder | 100% | 477.38 | 21 / 21 | 99% | 8.53 | 501 / 504 |
lung | 100% | 607.95 | 577 / 578 | 100% | 8.09 | 1150 / 1155 |
liver | 100% | 455.94 | 226 / 226 | 99% | 5.93 | 403 / 406 |
intestine | 100% | 539.53 | 966 / 966 | 99% | 7.05 | 522 / 527 |
brain | 100% | 580.19 | 2630 / 2642 | 99% | 6.52 | 701 / 705 |
esophagus | 100% | 521.17 | 1445 / 1445 | 99% | 5.97 | 181 / 183 |
thymus | 100% | 443.55 | 653 / 653 | 98% | 4.29 | 591 / 605 |
pancreas | 99% | 291.35 | 326 / 328 | 97% | 5.02 | 173 / 178 |
kidney | 100% | 883.17 | 89 / 89 | 92% | 5.21 | 833 / 901 |
adrenal gland | 100% | 557.67 | 258 / 258 | 91% | 3.76 | 209 / 230 |
adipose | 100% | 475.33 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 42.79 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 8.25 | 29 / 29 |
spleen | 100% | 617.60 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 7.55 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.46 | 1 / 1 |
blood vessel | 100% | 521.28 | 1332 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 869.04 | 926 / 929 | 0% | 0 | 0 / 0 |
muscle | 99% | 449.16 | 798 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 872.91 | 850 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0032007 | Biological process | negative regulation of TOR signaling |
GO_0031398 | Biological process | positive regulation of protein ubiquitination |
GO_1902018 | Biological process | negative regulation of cilium assembly |
GO_0009267 | Biological process | cellular response to starvation |
GO_0043547 | Biological process | positive regulation of GTPase activity |
GO_0070848 | Biological process | response to growth factor |
GO_0090630 | Biological process | activation of GTPase activity |
GO_1904262 | Biological process | negative regulation of TORC1 signaling |
GO_0033596 | Cellular component | TSC1-TSC2 complex |
GO_0036064 | Cellular component | ciliary basal body |
GO_0005829 | Cellular component | cytosol |
GO_0031410 | Cellular component | cytoplasmic vesicle |
GO_0005765 | Cellular component | lysosomal membrane |
GO_0005515 | Molecular function | protein binding |
GO_0031267 | Molecular function | small GTPase binding |
GO_0005096 | Molecular function | GTPase activator activity |
Gene name | TBC1D7 |
Protein name | TBC1 domain family member 7 TBC1 domain family member 7 (Cell migration-inducing protein 23) |
Synonyms | TBC7 HSPC239 |
Description | FUNCTION: Non-catalytic component of the TSC-TBC complex, a multiprotein complex that acts as a negative regulator of the canonical mTORC1 complex, an evolutionarily conserved central nutrient sensor that stimulates anabolic reactions and macromolecule biosynthesis to promote cellular biomass generation and growth . The TSC-TBC complex acts as a GTPase-activating protein (GAP) for the small GTPase RHEB, a direct activator of the protein kinase activity of mTORC1 . In absence of nutrients, the TSC-TBC complex inhibits mTORC1, thereby preventing phosphorylation of ribosomal protein S6 kinase (RPS6KB1 and RPS6KB2) and EIF4EBP1 (4E-BP1) by the mTORC1 signaling . The TSC-TBC complex is inactivated in response to nutrients, relieving inhibition of mTORC1 . . |
Accessions | ENST00000416436.5 U3KPY5 ENST00000607230.1 ENST00000452989.5 Q9P0N9 Q5SZL8 ENST00000607658.5 ENST00000450347.5 ENST00000420456.5 Q5SZM2 ENST00000343141.8 [Q9P0N9-4] U3KQ23 ENST00000606370.5 ENST00000606541.5 Q5SZL4 ENST00000379307.6 [Q9P0N9-2] ENST00000422136.5 ENST00000379300.8 [Q9P0N9-1] ENST00000356436.8 [Q9P0N9-1] ENST00000446018.5 ENST00000421203.6 ENST00000606214.5 [Q9P0N9-1] U3KPS8 ENST00000379291.5 U3KQQ0 ENST00000606530.1 B4DK47 Q5SZL6 U3KQD8 Q5SZL3 Q5SZM1 Q5SZL5 ENST00000428109.5 |