Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 15 studies | 45% ± 17% | |
microglial cell | 11 studies | 45% ± 15% | |
macrophage | 10 studies | 32% ± 15% | |
endothelial cell | 8 studies | 35% ± 13% | |
oligodendrocyte precursor cell | 7 studies | 26% ± 9% | |
interneuron | 6 studies | 33% ± 19% | |
dendritic cell | 6 studies | 19% ± 4% | |
myeloid cell | 6 studies | 23% ± 8% | |
GABAergic neuron | 6 studies | 39% ± 21% | |
fibroblast | 5 studies | 20% ± 3% | |
astrocyte | 5 studies | 34% ± 12% | |
glutamatergic neuron | 4 studies | 55% ± 14% | |
endothelial cell of lymphatic vessel | 4 studies | 21% ± 4% | |
neuron | 3 studies | 38% ± 21% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 12 studies | 35% ± 19% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 2162.98 | 2642 / 2642 | 100% | 15.24 | 702 / 705 |
esophagus | 100% | 1149.68 | 1444 / 1445 | 99% | 7.21 | 182 / 183 |
intestine | 100% | 1345.82 | 966 / 966 | 99% | 7.03 | 521 / 527 |
prostate | 100% | 1178.38 | 245 / 245 | 98% | 7.86 | 494 / 502 |
breast | 100% | 1391.86 | 459 / 459 | 98% | 10.38 | 1099 / 1118 |
stomach | 100% | 829.45 | 359 / 359 | 98% | 7.70 | 279 / 286 |
lung | 100% | 1411.77 | 578 / 578 | 97% | 5.42 | 1120 / 1155 |
kidney | 100% | 788.29 | 89 / 89 | 97% | 7.89 | 871 / 901 |
pancreas | 100% | 709.65 | 328 / 328 | 95% | 5.27 | 169 / 178 |
bladder | 100% | 1286.81 | 21 / 21 | 94% | 5.27 | 473 / 504 |
thymus | 100% | 1011.48 | 652 / 653 | 92% | 5.37 | 557 / 605 |
uterus | 100% | 1219.39 | 170 / 170 | 89% | 4.55 | 410 / 459 |
adrenal gland | 100% | 1008.05 | 258 / 258 | 89% | 4.22 | 205 / 230 |
skin | 100% | 1195.82 | 1808 / 1809 | 86% | 4.44 | 404 / 472 |
ovary | 100% | 1006.55 | 180 / 180 | 81% | 3.22 | 350 / 430 |
liver | 100% | 578.01 | 226 / 226 | 68% | 2.81 | 276 / 406 |
adipose | 100% | 1658.36 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1418.08 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 1431.78 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.64 | 1 / 1 |
muscle | 99% | 637.01 | 796 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 635.37 | 832 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 82% | 3.68 | 37 / 45 |
eye | 0% | 0 | 0 / 0 | 60% | 2.79 | 48 / 80 |
lymph node | 0% | 0 | 0 / 0 | 55% | 2.17 | 16 / 29 |
peripheral blood | 25% | 175.23 | 236 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_2000785 | Biological process | regulation of autophagosome assembly |
GO_0090630 | Biological process | activation of GTPase activity |
GO_0005776 | Cellular component | autophagosome |
GO_0055037 | Cellular component | recycling endosome |
GO_0005096 | Molecular function | GTPase activator activity |
Gene name | TBC1D12 |
Protein name | TBC1 domain family member 12 TBC1 domain family, member 12 |
Synonyms | KIAA0608 |
Description | FUNCTION: RAB11A-binding protein that plays a role in neurite outgrowth. . |
Accessions | ENST00000225235.5 B9A6L3 O60347 |