Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 17 studies | 35% ± 14% | |
type I pneumocyte | 11 studies | 45% ± 15% | |
oligodendrocyte precursor cell | 11 studies | 39% ± 15% | |
type II pneumocyte | 9 studies | 60% ± 10% | |
epithelial cell | 9 studies | 34% ± 20% | |
smooth muscle cell | 8 studies | 28% ± 8% | |
adipocyte | 8 studies | 28% ± 7% | |
basal cell | 7 studies | 33% ± 19% | |
club cell | 7 studies | 34% ± 8% | |
GABAergic neuron | 7 studies | 38% ± 18% | |
respiratory goblet cell | 6 studies | 35% ± 10% | |
endothelial cell | 6 studies | 28% ± 13% | |
interneuron | 6 studies | 37% ± 23% | |
cardiac muscle cell | 6 studies | 68% ± 21% | |
glutamatergic neuron | 5 studies | 43% ± 18% | |
astrocyte | 5 studies | 25% ± 9% | |
neuron | 4 studies | 27% ± 6% | |
fibroblast | 4 studies | 22% ± 2% | |
ionocyte | 3 studies | 34% ± 7% | |
secretory cell | 3 studies | 24% ± 5% | |
GABAergic interneuron | 3 studies | 25% ± 10% | |
myofibroblast cell | 3 studies | 32% ± 4% | |
squamous epithelial cell | 3 studies | 41% ± 24% | |
muscle cell | 3 studies | 50% ± 26% | |
pericyte | 3 studies | 27% ± 10% | |
goblet cell | 3 studies | 46% ± 38% | |
mucus secreting cell | 3 studies | 33% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 9184.83 | 244 / 245 | 100% | 22.35 | 502 / 502 |
esophagus | 100% | 8957.69 | 1440 / 1445 | 99% | 23.44 | 182 / 183 |
thymus | 100% | 7655.01 | 650 / 653 | 97% | 13.17 | 584 / 605 |
lung | 98% | 11124.01 | 567 / 578 | 98% | 20.01 | 1128 / 1155 |
intestine | 96% | 8544.22 | 929 / 966 | 99% | 15.56 | 520 / 527 |
stomach | 96% | 5047.24 | 346 / 359 | 98% | 17.12 | 281 / 286 |
uterus | 99% | 3903.53 | 168 / 170 | 94% | 14.55 | 431 / 459 |
bladder | 100% | 8937.10 | 21 / 21 | 90% | 11.08 | 453 / 504 |
breast | 88% | 2828.11 | 402 / 459 | 96% | 12.21 | 1076 / 1118 |
kidney | 90% | 3132.06 | 80 / 89 | 90% | 8.51 | 815 / 901 |
brain | 50% | 1540.42 | 1316 / 2642 | 88% | 7.67 | 622 / 705 |
pancreas | 36% | 894.75 | 119 / 328 | 96% | 10.23 | 171 / 178 |
adrenal gland | 37% | 902.29 | 95 / 258 | 89% | 10.76 | 204 / 230 |
skin | 73% | 11926.28 | 1324 / 1809 | 43% | 2.87 | 205 / 472 |
muscle | 100% | 40004.43 | 803 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 17.88 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 11.55 | 1 / 1 |
blood vessel | 98% | 5623.09 | 1310 / 1335 | 0% | 0 | 0 / 0 |
heart | 95% | 16768.46 | 821 / 861 | 0% | 0 | 0 / 0 |
liver | 10% | 219.87 | 22 / 226 | 76% | 5.49 | 310 / 406 |
ovary | 12% | 337.63 | 21 / 180 | 69% | 4.53 | 297 / 430 |
adipose | 79% | 2609.46 | 957 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 75% | 5.66 | 60 / 80 |
spleen | 0% | 11.42 | 1 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 7.41 | 3 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0021987 | Biological process | cerebral cortex development |
GO_0008283 | Biological process | cell population proliferation |
GO_0007052 | Biological process | mitotic spindle organization |
GO_0000226 | Biological process | microtubule cytoskeleton organization |
GO_0005813 | Cellular component | centrosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005886 | Cellular component | plasma membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0016922 | Molecular function | nuclear receptor binding |
Gene name | TACC2 |
Protein name | Transforming acidic coiled-coil containing protein 2 TACC2 protein HCG41426, isoform CRA_c (Transforming acidic coiled-coil containing protein 2) Transforming acidic coiled-coil-containing protein 2 (Anti-Zuai-1) (AZU-1) |
Synonyms | hCG_41426 |
Description | FUNCTION: Plays a role in the microtubule-dependent coupling of the nucleus and the centrosome. Involved in the processes that regulate centrosome-mediated interkinetic nuclear migration (INM) of neural progenitors (By similarity). May play a role in organizing centrosomal microtubules. May act as a tumor suppressor protein. May represent a tumor progression marker. . |
Accessions | ENST00000334433.7 [O95359-4] Q4VXL8 E9PGB3 B2RWP4 ENST00000369005.6 [O95359-4] H0Y8P9 ENST00000440764.2 E7EMZ9 A0A0U1RRM9 ENST00000368999.5 B7ZMJ9 D6RAA5 O95359 Q4VXL4 ENST00000505639.5 ENST00000496913.6 ENST00000635597.1 ENST00000515603.5 ENST00000453444.6 ENST00000491540.1 H0YA73 ENST00000260733.7 [O95359-1] H0Y911 H0Y9Y7 ENST00000515273.5 ENST00000360561.7 [O95359-6] ENST00000508411.1 ENST00000514539.5 H0Y9C3 ENST00000369001.5 ENST00000490979.1 ENST00000358010.5 [O95359-5] ENST00000369000.5 [O95359-2] ENST00000513429.5 [O95359-5] H0Y954 ENST00000369004.7 E9PBC6 |