SYT16 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
glutamatergic neuron	11 studies	57% ± 26%	Explore
GABAergic neuron	9 studies	56% ± 27%	Explore
oligodendrocyte precursor cell	9 studies	34% ± 13%	Explore
interneuron	5 studies	63% ± 29%	Explore
neuron	4 studies	30% ± 7%	Explore
GABAergic interneuron	3 studies	52% ± 21%	Explore
glycinergic amacrine cell	3 studies	26% ± 9%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	11 studies	40% ± 27%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	96%	2138.70	2530 / 2642	75%	4.60	527 / 705
pancreas	71%	400.07	232 / 328	35%	1.20	63 / 178
ureter	0%	0	0 / 0	100%	1.22	1 / 1
prostate	56%	229.90	136 / 245	35%	1.07	176 / 502
kidney	27%	72.88	24 / 89	19%	0.55	175 / 901
bladder	19%	59.67	4 / 21	15%	0.36	75 / 504
uterus	21%	80.47	36 / 170	6%	0.13	27 / 459
lung	1%	1.05	3 / 578	7%	0.17	78 / 1155
adrenal gland	3%	5.60	8 / 258	3%	0.10	8 / 230
breast	2%	4.85	10 / 459	2%	0.04	24 / 1118
stomach	1%	2.37	4 / 359	2%	0.04	5 / 286
esophagus	0%	0	0 / 1445	3%	0.04	5 / 183
intestine	0%	0	0 / 966	2%	0.11	13 / 527
ovary	1%	4.56	1 / 180	2%	0.05	8 / 430
tonsil	0%	0	0 / 0	2%	0.02	1 / 45
skin	0%	0.55	5 / 1809	0%	0.01	2 / 472
liver	0%	0	0 / 226	0%	0.01	2 / 406
thymus	0%	0.91	3 / 653	0%	0	0 / 605
blood vessel	0%	0.64	3 / 1335	0%	0	0 / 0
heart	0%	0.19	1 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
adipose	0%	0	0 / 1204	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
muscle	0%	0	0 / 803	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0