SYNPR report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
glutamatergic neuron	11 studies	35% ± 16%	Explore
GABAergic neuron	9 studies	48% ± 22%	Explore
amacrine cell	7 studies	56% ± 25%	Explore
retina horizontal cell	6 studies	39% ± 11%	Explore
Mueller cell	5 studies	20% ± 2%	Explore
interneuron	5 studies	56% ± 29%	Explore
GABAergic amacrine cell	4 studies	58% ± 21%	Explore
glycinergic amacrine cell	3 studies	35% ± 11%	Explore
granule cell	3 studies	72% ± 12%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	10 studies	30% ± 17%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	91%	8713.81	2398 / 2642	75%	12.48	527 / 705
ureter	0%	0	0 / 0	100%	1.47	1 / 1
eye	0%	0	0 / 0	71%	33.22	57 / 80
adrenal gland	0%	6.20	1 / 258	33%	4.87	75 / 230
thymus	1%	5.34	4 / 653	22%	1.67	132 / 605
skin	0%	0	0 / 1809	19%	3.42	89 / 472
stomach	0%	0	0 / 359	17%	1.36	48 / 286
intestine	0%	0	0 / 966	12%	0.71	65 / 527
esophagus	0%	0.55	1 / 1445	12%	0.77	22 / 183
pancreas	0%	0	0 / 328	7%	0.25	13 / 178
bladder	0%	0	0 / 21	7%	0.61	36 / 504
lung	0%	0	0 / 578	4%	0.23	45 / 1155
ovary	0%	0	0 / 180	3%	0.07	11 / 430
heart	3%	21.32	22 / 861	0%	0	0 / 0
uterus	0%	0	0 / 170	2%	0.06	8 / 459
breast	0%	0	0 / 459	1%	0.04	9 / 1118
liver	0%	0	0 / 226	0%	0.00	1 / 406
kidney	0%	0	0 / 89	0%	0.01	2 / 901
abdomen	0%	0	0 / 0	0%	0	0 / 0
adipose	0%	0	0 / 1204	0%	0	0 / 0
blood vessel	0%	0	0 / 1335	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
muscle	0%	0	0 / 803	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
prostate	0%	0	0 / 245	0%	0	0 / 502
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45