SYCE1 | OmnibusX

Name	Number of supported studies	Average coverage
glutamatergic neuron	3 studies	38% ± 17%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of SYCE1 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	96%	862.15	2538 / 2642	15%	0.37	109 / 705
ovary	69%	175.41	125 / 180	4%	0.08	16 / 430
thymus	56%	127.93	366 / 653	7%	0.18	42 / 605
liver	58%	117.73	130 / 226	5%	0.10	22 / 406
pancreas	60%	150.31	197 / 328	2%	0.02	3 / 178
breast	56%	117.45	258 / 459	1%	0.02	14 / 1118
prostate	48%	152.11	118 / 245	5%	0.09	25 / 502
adipose	38%	65.71	455 / 1204	0%	0	0 / 0
kidney	35%	52.31	31 / 89	2%	0.04	18 / 901
uterus	34%	48.09	57 / 170	3%	0.08	15 / 459
adrenal gland	33%	60.90	85 / 258	3%	0.06	6 / 230
spleen	35%	65.96	84 / 241	0%	0	0 / 0
esophagus	22%	34.02	317 / 1445	2%	0.03	3 / 183
intestine	23%	32.80	224 / 966	0%	0.01	2 / 527
bladder	14%	14.33	3 / 21	0%	0	0 / 504
lung	13%	15.71	74 / 578	1%	0.03	16 / 1155
stomach	14%	22.29	49 / 359	0%	0.00	1 / 286
skin	10%	17.58	180 / 1809	1%	0.02	5 / 472
heart	10%	12.52	86 / 861	0%	0	0 / 0
blood vessel	7%	9.78	91 / 1335	0%	0	0 / 0
peripheral blood	4%	10.33	33 / 929	0%	0	0 / 0
muscle	3%	4.67	22 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1

Gene name	SYCE1
Protein name	Synaptonemal complex central element protein 1 (Cancer/testis antigen 76) (CT76) Synaptonemal complex central element protein 1 Shadow of prion protein
Synonyms	C10orf94
Description	FUNCTION: Major component of the transverse central element of synaptonemal complexes (SCS), formed between homologous chromosomes during meiotic prophase. Requires SYCP1 in order to be incorporated into the central element. May have a role in the synaptonemal complex assembly, stabilization and recombination. . FUNCTION: Prion-like protein that has PrP(C)-like neuroprotective activity. May act as a modulator for the biological actions of normal and abnormal PrP. .
Accessions	ENST00000432597.3 ENST00000303903.10 ENST00000343131.7 [Q8N0S2-1] ENST00000368517.7 [Q8N0S2-2] A0A0B4J1R9 A0A0A0MT28 Q8N0S2

GO_0007130	Biological process	synaptonemal complex assembly
GO_0051301	Biological process	cell division
GO_0000801	Cellular component	central element
GO_0005694	Cellular component	chromosome
GO_0000795	Cellular component	synaptonemal complex
GO_0005515	Molecular function	protein binding

SYCE1 report