Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 12 studies | 55% ± 25% | |
GABAergic neuron | 7 studies | 49% ± 22% | |
neuron | 6 studies | 24% ± 10% | |
retina horizontal cell | 6 studies | 33% ± 10% | |
astrocyte | 6 studies | 30% ± 15% | |
interneuron | 5 studies | 38% ± 23% | |
endothelial cell | 4 studies | 32% ± 14% | |
retinal bipolar neuron | 4 studies | 28% ± 9% | |
GABAergic interneuron | 3 studies | 32% ± 3% | |
retinal ganglion cell | 3 studies | 37% ± 6% | |
epithelial cell | 3 studies | 25% ± 2% | |
amacrine cell | 3 studies | 35% ± 4% | |
ON-bipolar cell | 3 studies | 32% ± 8% | |
rod bipolar cell | 3 studies | 31% ± 8% | |
hepatocyte | 3 studies | 65% ± 26% | |
goblet cell | 3 studies | 26% ± 11% | |
granule cell | 3 studies | 42% ± 6% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 11 studies | 39% ± 23% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 98% | 6034.76 | 2583 / 2642 | 99% | 46.82 | 696 / 705 |
adrenal gland | 100% | 4813.83 | 258 / 258 | 91% | 35.33 | 210 / 230 |
prostate | 93% | 1088.12 | 227 / 245 | 97% | 15.46 | 486 / 502 |
intestine | 98% | 1716.97 | 944 / 966 | 91% | 15.38 | 482 / 527 |
liver | 100% | 3323.38 | 225 / 226 | 87% | 19.68 | 354 / 406 |
pancreas | 100% | 7196.40 | 328 / 328 | 85% | 11.97 | 151 / 178 |
stomach | 100% | 2682.36 | 358 / 359 | 84% | 14.23 | 239 / 286 |
breast | 100% | 2979.05 | 459 / 459 | 83% | 20.86 | 929 / 1118 |
thymus | 99% | 1743.61 | 646 / 653 | 60% | 8.31 | 365 / 605 |
lung | 74% | 1153.68 | 430 / 578 | 60% | 9.67 | 698 / 1155 |
ovary | 71% | 1014.45 | 127 / 180 | 64% | 9.61 | 276 / 430 |
esophagus | 78% | 1392.70 | 1130 / 1445 | 50% | 6.37 | 91 / 183 |
bladder | 71% | 598.52 | 15 / 21 | 37% | 6.03 | 184 / 504 |
uterus | 70% | 682.24 | 119 / 170 | 36% | 5.16 | 164 / 459 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.68 | 1 / 1 |
adipose | 100% | 2374.29 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 82% | 1371.44 | 1092 / 1335 | 0% | 0 | 0 / 0 |
skin | 70% | 829.24 | 1259 / 1809 | 10% | 0.74 | 45 / 472 |
kidney | 20% | 168.94 | 18 / 89 | 52% | 8.02 | 469 / 901 |
eye | 0% | 0 | 0 / 0 | 64% | 6.96 | 51 / 80 |
tonsil | 0% | 0 | 0 / 0 | 36% | 3.24 | 16 / 45 |
heart | 27% | 247.04 | 233 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 21% | 5.29 | 6 / 29 |
muscle | 6% | 47.14 | 50 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 2% | 12.68 | 16 / 929 | 0% | 0 | 0 / 0 |
spleen | 0% | 5.94 | 1 / 241 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1990048 | Biological process | anterograde neuronal dense core vesicle transport |
GO_0019896 | Biological process | axonal transport of mitochondrion |
GO_0060025 | Biological process | regulation of synaptic activity |
GO_0060074 | Biological process | synapse maturation |
GO_0035774 | Biological process | positive regulation of insulin secretion involved in cellular response to glucose stimulus |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0000139 | Cellular component | Golgi membrane |
GO_0031982 | Cellular component | vesicle |
GO_0005881 | Cellular component | cytoplasmic microtubule |
GO_0005874 | Cellular component | microtubule |
GO_0031410 | Cellular component | cytoplasmic vesicle |
GO_1904115 | Cellular component | axon cytoplasm |
GO_0005515 | Molecular function | protein binding |
Gene name | SYBU |
Protein name | Syntabulin Syntabulin (Golgi-localized syntaphilin-related protein) (Syntaxin-1-binding protein) |
Synonyms | KIAA1472 GOLSYN |
Description | FUNCTION: Part of a kinesin motor-adapter complex that is critical for the anterograde axonal transport of active zone components and contributes to activity-dependent presynaptic assembly during neuronal development. . |
Accessions | ENST00000532779.5 [Q9NX95-2] ENST00000533065.5 [Q9NX95-5] E9PL66 ENST00000534501.5 E9PL50 ENST00000532594.1 ENST00000524720.5 E9PJ11 ENST00000529690.5 E9PN31 ENST00000399066.7 [Q9NX95-4] ENST00000529190.5 ENST00000533394.5 ENST00000440310.5 [Q9NX95-1] E9PI48 ENST00000526302.5 ENST00000527600.5 B3KRD1 E9PPC2 ENST00000424158.6 E9PNN9 E9PPS4 ENST00000276646.14 [Q9NX95-1] ENST00000533821.5 ENST00000433638.1 [Q9NX95-1] ENST00000528569.5 ENST00000533171.5 [Q9NX95-1] ENST00000422135.5 [Q9NX95-1] E9PRT7 Q9NX95 ENST00000528045.5 ENST00000531230.5 ENST00000528716.5 ENST00000529175.5 ENST00000530841.5 E9PQE2 E9PLB9 ENST00000528331.5 [Q9NX95-5] E9PK96 ENST00000408889.7 [Q9NX95-5] E9PQG2 E9PRH8 ENST00000534578.5 ENST00000528647.5 [Q9NX95-3] ENST00000533895.5 [Q9NX95-3] ENST00000534184.5 ENST00000446070.6 [Q9NX95-3] ENST00000532189.5 A0A0C4DG86 B7Z4D2 ENST00000408908.6 [Q9NX95-1] |