SVOP report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
glutamatergic neuron	11 studies	37% ± 23%	Explore
GABAergic neuron	7 studies	44% ± 21%	Explore
interneuron	5 studies	43% ± 21%	Explore
neuron	4 studies	24% ± 6%	Explore
GABAergic interneuron	3 studies	24% ± 2%	Explore
retinal cone cell	3 studies	25% ± 11%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	8 studies	32% ± 23%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	90%	4719.60	2385 / 2642	77%	14.74	544 / 705
adrenal gland	7%	42.82	17 / 258	66%	16.90	152 / 230
pancreas	1%	4.36	3 / 328	38%	3.16	68 / 178
lymph node	0%	0	0 / 0	14%	0.55	4 / 29
heart	10%	81.09	90 / 861	0%	0	0 / 0
intestine	1%	3.37	7 / 966	4%	0.25	23 / 527
stomach	0%	1.18	1 / 359	3%	0.13	10 / 286
esophagus	0%	0	0 / 1445	3%	0.11	6 / 183
breast	0%	0	0 / 459	3%	0.19	35 / 1118
eye	0%	0	0 / 0	3%	0.27	2 / 80
liver	0%	0	0 / 226	2%	0.08	10 / 406
kidney	0%	0	0 / 89	2%	0.07	22 / 901
lung	0%	0	0 / 578	2%	0.07	22 / 1155
ovary	0%	0	0 / 180	1%	0.05	6 / 430
uterus	0%	0	0 / 170	1%	0.02	5 / 459
bladder	0%	0	0 / 21	1%	0.06	4 / 504
prostate	0%	0	0 / 245	0%	0.03	2 / 502
skin	0%	0.95	3 / 1809	0%	0.00	1 / 472
blood vessel	0%	0.37	1 / 1335	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
adipose	0%	0	0 / 1204	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
muscle	0%	0	0 / 803	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
thymus	0%	0	0 / 653	0%	0	0 / 605
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1