Name | Number of supported studies | Average coverage | |
---|---|---|---|
plasmacytoid dendritic cell | 11 studies | 28% ± 10% | |
mast cell | 7 studies | 22% ± 6% | |
oligodendrocyte precursor cell | 7 studies | 28% ± 11% | |
GABAergic neuron | 5 studies | 36% ± 16% | |
glutamatergic neuron | 5 studies | 45% ± 17% | |
macrophage | 5 studies | 24% ± 4% | |
monocyte | 4 studies | 24% ± 5% | |
interneuron | 4 studies | 38% ± 13% | |
endothelial cell | 3 studies | 22% ± 7% | |
microglial cell | 3 studies | 20% ± 4% | |
alveolar macrophage | 3 studies | 24% ± 6% | |
fibroblast | 3 studies | 17% ± 1% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 35% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 1045.88 | 578 / 578 | 99% | 15.63 | 1147 / 1155 |
stomach | 99% | 582.83 | 354 / 359 | 99% | 17.50 | 284 / 286 |
breast | 100% | 545.02 | 459 / 459 | 97% | 10.85 | 1082 / 1118 |
thymus | 100% | 463.60 | 651 / 653 | 96% | 12.89 | 581 / 605 |
intestine | 95% | 479.37 | 918 / 966 | 100% | 18.23 | 527 / 527 |
pancreas | 96% | 356.30 | 315 / 328 | 98% | 17.30 | 175 / 178 |
kidney | 100% | 1230.97 | 89 / 89 | 94% | 14.91 | 847 / 901 |
prostate | 99% | 480.28 | 243 / 245 | 94% | 10.62 | 472 / 502 |
esophagus | 94% | 275.57 | 1362 / 1445 | 99% | 13.52 | 181 / 183 |
uterus | 98% | 367.95 | 167 / 170 | 92% | 9.66 | 422 / 459 |
adrenal gland | 100% | 1027.78 | 258 / 258 | 86% | 16.74 | 197 / 230 |
brain | 85% | 458.05 | 2252 / 2642 | 96% | 13.05 | 676 / 705 |
bladder | 81% | 704.67 | 17 / 21 | 98% | 15.52 | 495 / 504 |
skin | 95% | 466.03 | 1715 / 1809 | 80% | 9.26 | 378 / 472 |
ovary | 62% | 168.18 | 112 / 180 | 78% | 5.55 | 334 / 430 |
liver | 58% | 140.39 | 131 / 226 | 50% | 3.43 | 201 / 406 |
spleen | 100% | 975.52 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.09 | 1 / 1 |
adipose | 100% | 664.72 | 1203 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 1246.51 | 928 / 929 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 695.89 | 1332 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 492.86 | 843 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 8.14 | 44 / 45 |
lymph node | 0% | 0 | 0 / 0 | 93% | 10.23 | 27 / 29 |
eye | 0% | 0 | 0 / 0 | 74% | 5.28 | 59 / 80 |
muscle | 36% | 65.49 | 293 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016020 | Cellular component | membrane |
GO_0005509 | Molecular function | calcium ion binding |
Gene name | SUSD1 |
Protein name | Sushi domain containing 1 Sushi domain-containing protein 1 |
Synonyms | UNQ2438/PRO4999 |
Description | |
Accessions | ENST00000374264.6 [Q6UWL2-2] ENST00000355396.7 Q6UWL2 ENST00000475283.2 H0YCH6 H0Y6B2 H3BLV4 ENST00000374270.8 [Q6UWL2-1] ENST00000415074.1 ENST00000374263.7 F8WAQ1 |