Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 12 studies | 61% ± 19% | |
neuron | 10 studies | 63% ± 22% | |
GABAergic neuron | 9 studies | 56% ± 20% | |
retinal ganglion cell | 8 studies | 79% ± 30% | |
interneuron | 7 studies | 62% ± 17% | |
endothelial cell | 5 studies | 34% ± 19% | |
retina horizontal cell | 5 studies | 65% ± 22% | |
astrocyte | 5 studies | 33% ± 11% | |
pancreatic A cell | 4 studies | 49% ± 19% | |
type B pancreatic cell | 4 studies | 42% ± 12% | |
microglial cell | 4 studies | 25% ± 7% | |
OFF-bipolar cell | 4 studies | 47% ± 34% | |
GABAergic amacrine cell | 4 studies | 40% ± 12% | |
glycinergic amacrine cell | 4 studies | 46% ± 10% | |
amacrine cell | 4 studies | 64% ± 9% | |
GABAergic interneuron | 3 studies | 47% ± 19% | |
granule cell | 3 studies | 63% ± 14% | |
oligodendrocyte precursor cell | 3 studies | 22% ± 2% | |
ON-bipolar cell | 3 studies | 54% ± 34% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 94% | 23760.31 | 2493 / 2642 | 94% | 178.61 | 665 / 705 |
intestine | 59% | 1538.30 | 567 / 966 | 30% | 6.55 | 160 / 527 |
pancreas | 0% | 4.60 | 1 / 328 | 87% | 38.90 | 155 / 178 |
adrenal gland | 9% | 378.75 | 23 / 258 | 65% | 554.41 | 150 / 230 |
stomach | 14% | 288.22 | 50 / 359 | 27% | 3.16 | 78 / 286 |
breast | 1% | 15.61 | 3 / 459 | 40% | 3.55 | 444 / 1118 |
skin | 21% | 1375.49 | 382 / 1809 | 17% | 2.32 | 82 / 472 |
prostate | 2% | 54.16 | 6 / 245 | 30% | 3.71 | 152 / 502 |
liver | 0% | 0 | 0 / 226 | 31% | 4.82 | 124 / 406 |
thymus | 0% | 0 | 0 / 653 | 30% | 2.80 | 179 / 605 |
uterus | 1% | 12.86 | 1 / 170 | 23% | 4.85 | 104 / 459 |
bladder | 0% | 0 | 0 / 21 | 18% | 4.53 | 93 / 504 |
lung | 0% | 0 | 0 / 578 | 14% | 2.29 | 158 / 1155 |
esophagus | 8% | 151.94 | 117 / 1445 | 4% | 0.83 | 7 / 183 |
kidney | 0% | 0 | 0 / 89 | 8% | 1.66 | 71 / 901 |
eye | 0% | 0 | 0 / 0 | 8% | 2.30 | 6 / 80 |
adipose | 6% | 186.38 | 70 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.14 | 1 / 29 |
ovary | 0% | 0 | 0 / 180 | 3% | 0.46 | 13 / 430 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.17 | 1 / 45 |
blood vessel | 1% | 27.49 | 8 / 1335 | 0% | 0 | 0 / 0 |
spleen | 0% | 5.56 | 1 / 241 | 0% | 0 | 0 / 0 |
heart | 0% | 5.23 | 2 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007019 | Biological process | microtubule depolymerization |
GO_0010976 | Biological process | positive regulation of neuron projection development |
GO_0031175 | Biological process | neuron projection development |
GO_0031115 | Biological process | negative regulation of microtubule polymerization |
GO_0031110 | Biological process | regulation of microtubule polymerization or depolymerization |
GO_0007026 | Biological process | negative regulation of microtubule depolymerization |
GO_0031117 | Biological process | positive regulation of microtubule depolymerization |
GO_0010977 | Biological process | negative regulation of neuron projection development |
GO_1990090 | Biological process | cellular response to nerve growth factor stimulus |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0016020 | Cellular component | membrane |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0043025 | Cellular component | neuronal cell body |
GO_0043005 | Cellular component | neuron projection |
GO_0005829 | Cellular component | cytosol |
GO_0030426 | Cellular component | growth cone |
GO_0005737 | Cellular component | cytoplasm |
GO_0005768 | Cellular component | endosome |
GO_0030027 | Cellular component | lamellipodium |
GO_0015631 | Molecular function | tubulin binding |
GO_0048306 | Molecular function | calcium-dependent protein binding |
GO_0005515 | Molecular function | protein binding |
Gene name | STMN2 |
Protein name | Stathmin-2 (Superior cervical ganglion-10 protein) (Protein SCG10) Stathmin |
Synonyms | SCGN10 SCG10 |
Description | FUNCTION: Regulator of microtubule stability. When phosphorylated by MAPK8, stabilizes microtubules and consequently controls neurite length in cortical neurons. In the developing brain, negatively regulates the rate of exit from multipolar stage and retards radial migration from the ventricular zone (By similarity). . |
Accessions | ENST00000518111.5 [Q93045-2] Q93045 ENST00000220876.12 [Q93045-1] ENST00000518491.1 E5RGX5 |