ST8SIA5 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
glutamatergic neuron	9 studies	45% ± 24%	Explore
GABAergic neuron	7 studies	51% ± 17%	Explore
interneuron	5 studies	38% ± 16%	Explore
oligodendrocyte precursor cell	4 studies	23% ± 8%	Explore
endothelial cell	3 studies	31% ± 9%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	8 studies	35% ± 23%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	99%	4698.77	2612 / 2642	74%	6.18	525 / 705
adrenal gland	100%	3555.17	258 / 258	42%	3.63	97 / 230
kidney	90%	315.89	80 / 89	11%	0.70	99 / 901
muscle	91%	417.76	728 / 803	0%	0	0 / 0
heart	91%	625.11	780 / 861	0%	0	0 / 0
ovary	6%	15.71	11 / 180	13%	0.32	55 / 430
prostate	11%	25.51	28 / 245	0%	0.00	1 / 502
skin	0%	1.22	4 / 1809	11%	1.39	51 / 472
stomach	3%	7.59	12 / 359	0%	0.01	1 / 286
peripheral blood	4%	8.93	33 / 929	0%	0	0 / 0
lymph node	0%	0	0 / 0	3%	0.04	1 / 29
thymus	1%	2.92	7 / 653	2%	0.05	13 / 605
uterus	0%	0	0 / 170	3%	0.05	12 / 459
lung	1%	3.21	7 / 578	1%	0.01	8 / 1155
pancreas	1%	0.99	2 / 328	1%	0.02	2 / 178
intestine	1%	1.74	7 / 966	1%	0.03	3 / 527
eye	0%	0	0 / 0	1%	0.02	1 / 80
bladder	0%	0	0 / 21	1%	0.08	5 / 504
breast	0%	0.34	1 / 459	1%	0.01	6 / 1118
esophagus	0%	0.38	3 / 1445	1%	0.01	1 / 183
blood vessel	1%	2.24	10 / 1335	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
adipose	0%	0	0 / 1204	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
liver	0%	0	0 / 226	0%	0	0 / 406
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1