SSX5 | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of SSX5 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	32%	4.48	206 / 653	21%	0.52	128 / 605
eye	0%	0	0 / 0	45%	7.12	36 / 80
spleen	37%	2.29	90 / 241	0%	0	0 / 0
bladder	14%	0.86	3 / 21	2%	0.12	12 / 504
skin	1%	1.16	13 / 1809	12%	0.83	58 / 472
esophagus	8%	0.74	121 / 1445	2%	0.52	3 / 183
liver	0%	0.03	1 / 226	9%	0.45	35 / 406
lung	5%	1.70	28 / 578	4%	0.63	45 / 1155
ovary	1%	0.02	1 / 180	6%	0.98	26 / 430
intestine	4%	0.24	40 / 966	2%	0.12	9 / 527
adipose	6%	1.98	67 / 1204	0%	0	0 / 0
stomach	3%	0.16	11 / 359	2%	0.09	7 / 286
uterus	2%	0.09	4 / 170	2%	0.26	8 / 459
prostate	4%	0.25	9 / 245	0%	0.02	2 / 502
kidney	3%	0.13	3 / 89	1%	0.04	6 / 901
lymph node	0%	0	0 / 0	3%	0.07	1 / 29
breast	3%	0.15	12 / 459	0%	0.06	3 / 1118
pancreas	0%	0.01	1 / 328	2%	0.31	3 / 178
brain	1%	0.27	29 / 2642	0%	0.04	2 / 705
heart	1%	2.20	8 / 861	0%	0	0 / 0
blood vessel	1%	0.54	8 / 1335	0%	0	0 / 0
muscle	0%	0.66	4 / 803	0%	0	0 / 0
adrenal gland	0%	0	0 / 258	0%	0.01	1 / 230
peripheral blood	0%	0.65	4 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0006355	Biological process	regulation of DNA-templated transcription
GO_0005634	Cellular component	nucleus
GO_0005515	Molecular function	protein binding

Gene name	SSX5
Protein name	Synovial sarcoma, X breakpoint 5 Protein SSX5
Synonyms	RP11-38O23.8-003
Description	FUNCTION: Could act as a modulator of transcription.
Accessions	H7BYZ5 O60225 ENST00000311798.5 [O60225-2] ENST00000347757.6 [O60225-1]

SSX5 report