SSX4 | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of SSX4 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	10%	0.14	66 / 653	0%	0	0 / 605
prostate	7%	0.07	17 / 245	0%	0	0 / 502
ovary	7%	0.07	12 / 180	0%	0.00	1 / 430
lung	5%	0.05	27 / 578	0%	0.01	4 / 1155
bladder	5%	0.05	1 / 21	0%	0	0 / 504
brain	5%	0.05	122 / 2642	0%	0	0 / 705
peripheral blood	5%	0.05	42 / 929	0%	0	0 / 0
esophagus	4%	0.04	55 / 1445	1%	0.01	1 / 183
blood vessel	4%	0.04	58 / 1335	0%	0	0 / 0
skin	4%	0.04	78 / 1809	0%	0	0 / 472
intestine	4%	0.04	41 / 966	0%	0	0 / 527
breast	4%	0.05	18 / 459	0%	0	0 / 1118
adipose	4%	0.04	47 / 1204	0%	0	0 / 0
adrenal gland	4%	0.04	10 / 258	0%	0	0 / 230
heart	4%	0.04	33 / 861	0%	0	0 / 0
stomach	3%	0.03	12 / 359	0%	0	0 / 286
spleen	3%	0.04	8 / 241	0%	0	0 / 0
muscle	3%	0.03	26 / 803	0%	0	0 / 0
liver	3%	0.04	7 / 226	0%	0	0 / 406
pancreas	3%	0.03	9 / 328	0%	0	0 / 178
uterus	2%	0.02	4 / 170	0%	0	0 / 459
kidney	1%	0.01	1 / 89	0%	0.00	2 / 901
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1

Gene name	SSX4
Protein name	Protein SSX4 (Cancer/testis antigen 5.4) (CT5.4)
Synonyms	SSX4B SSX4A;
Description	FUNCTION: Could act as a modulator of transcription.
Accessions	ENST00000595689.3 [O60224-1] ENST00000619890.1 [O60224-2] ENST00000620320.4 [O60224-2] O60224 ENST00000595235.6 [O60224-1]

GO_0006355	Biological process	regulation of DNA-templated transcription
GO_0005634	Cellular component	nucleus
GO_0005515	Molecular function	protein binding

SSX4 report