Name | Number of supported studies | Average coverage | |
---|---|---|---|
retinal rod cell | 5 studies | 27% ± 6% | |
retinal cone cell | 4 studies | 25% ± 6% |
Insufficient scRNA-seq data for expression of SPTBN5 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 94% | 801.71 | 432 / 459 | 73% | 2.81 | 814 / 1118 |
thymus | 100% | 1515.00 | 653 / 653 | 67% | 1.58 | 403 / 605 |
esophagus | 81% | 578.28 | 1173 / 1445 | 83% | 2.86 | 152 / 183 |
pancreas | 82% | 371.62 | 269 / 328 | 80% | 2.54 | 142 / 178 |
uterus | 80% | 418.61 | 136 / 170 | 77% | 3.04 | 352 / 459 |
bladder | 90% | 1743.76 | 19 / 21 | 66% | 2.41 | 332 / 504 |
lung | 97% | 819.95 | 561 / 578 | 54% | 1.45 | 625 / 1155 |
kidney | 97% | 735.92 | 86 / 89 | 44% | 1.50 | 400 / 901 |
stomach | 92% | 477.33 | 330 / 359 | 42% | 1.48 | 121 / 286 |
prostate | 97% | 1140.40 | 238 / 245 | 36% | 0.61 | 182 / 502 |
intestine | 80% | 316.62 | 773 / 966 | 53% | 1.89 | 277 / 527 |
ovary | 96% | 416.58 | 173 / 180 | 35% | 0.78 | 152 / 430 |
skin | 76% | 634.35 | 1377 / 1809 | 28% | 0.66 | 134 / 472 |
brain | 73% | 1023.88 | 1931 / 2642 | 27% | 0.55 | 192 / 705 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.87 | 1 / 1 |
liver | 78% | 546.96 | 176 / 226 | 20% | 0.82 | 80 / 406 |
heart | 93% | 617.41 | 798 / 861 | 0% | 0 | 0 / 0 |
adrenal gland | 60% | 208.34 | 154 / 258 | 29% | 0.55 | 66 / 230 |
adipose | 88% | 547.57 | 1063 / 1204 | 0% | 0 | 0 / 0 |
spleen | 82% | 334.66 | 197 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 73% | 1.78 | 33 / 45 |
blood vessel | 68% | 362.23 | 910 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 34% | 110.78 | 313 / 929 | 0% | 0 | 0 / 0 |
muscle | 21% | 55.22 | 165 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 17% | 0.59 | 5 / 29 |
eye | 0% | 0 | 0 / 0 | 8% | 0.54 | 6 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007041 | Biological process | lysosomal transport |
GO_0051693 | Biological process | actin filament capping |
GO_0030036 | Biological process | actin cytoskeleton organization |
GO_0007030 | Biological process | Golgi organization |
GO_0032391 | Cellular component | photoreceptor connecting cilium |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0030864 | Cellular component | cortical actin cytoskeleton |
GO_0045179 | Cellular component | apical cortex |
GO_0097381 | Cellular component | photoreceptor disc membrane |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0042995 | Cellular component | cell projection |
GO_0030054 | Cellular component | cell junction |
GO_0005875 | Cellular component | microtubule associated complex |
GO_0008091 | Cellular component | spectrin |
GO_0030507 | Molecular function | spectrin binding |
GO_0034452 | Molecular function | dynactin binding |
GO_0051015 | Molecular function | actin filament binding |
GO_0002046 | Molecular function | opsin binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0032029 | Molecular function | myosin tail binding |
GO_0045505 | Molecular function | dynein intermediate chain binding |
GO_0003779 | Molecular function | actin binding |
GO_0019894 | Molecular function | kinesin binding |
Gene name | SPTBN5 |
Protein name | Spectrin beta chain, non-erythrocytic 5 (Beta-V spectrin) |
Synonyms | BSPECV HUBSPECV HUSPECV |
Description | |
Accessions | Q9NRC6 ENST00000320955.8 |