SPP2 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
hepatocyte	5 studies	38% ± 15%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
liver	100%	3272.50	226 / 226	84%	169.20	340 / 406
lung	2%	0.13	9 / 578	6%	1.27	74 / 1155
peripheral blood	6%	2.27	59 / 929	0%	0	0 / 0
brain	1%	0.27	38 / 2642	0%	0.01	1 / 705
uterus	1%	0.18	2 / 170	0%	0.01	1 / 459
skin	1%	0.15	18 / 1809	0%	0.01	1 / 472
adipose	1%	0.59	14 / 1204	0%	0	0 / 0
bladder	0%	0	0 / 21	1%	0.11	5 / 504
pancreas	1%	0.05	3 / 328	0%	0	0 / 178
spleen	1%	3.10	2 / 241	0%	0	0 / 0
intestine	0%	0.05	4 / 966	0%	0.42	2 / 527
thymus	1%	0.08	5 / 653	0%	0	0 / 605
blood vessel	1%	0.09	8 / 1335	0%	0	0 / 0
stomach	1%	0.04	2 / 359	0%	0	0 / 286
breast	0%	0.27	2 / 459	0%	0.01	1 / 1118
esophagus	0%	0.04	6 / 1445	0%	0	0 / 183
prostate	0%	0.03	1 / 245	0%	0	0 / 502
adrenal gland	0%	0.03	1 / 258	0%	0	0 / 230
ovary	0%	0	0 / 180	0%	0.01	1 / 430
heart	0%	0.07	2 / 861	0%	0	0 / 0
kidney	0%	0	0 / 89	0%	0.02	2 / 901
muscle	0%	0.01	1 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1