Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| ciliated cell | 19 studies | 63% ± 14% | |
| glutamatergic neuron | 5 studies | 47% ± 24% | |
| endothelial cell | 4 studies | 23% ± 6% | |
| epithelial cell | 4 studies | 29% ± 14% | |
| astrocyte | 4 studies | 33% ± 14% | |
| GABAergic neuron | 3 studies | 44% ± 10% | |
| ependymal cell | 3 studies | 60% ± 12% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 6 studies | 32% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| thymus | 100% | 1653.47 | 653 / 653 | 94% | 2.88 | 570 / 605 |
| kidney | 99% | 1371.01 | 88 / 89 | 88% | 3.37 | 796 / 901 |
| prostate | 100% | 967.76 | 245 / 245 | 86% | 1.75 | 432 / 502 |
| breast | 98% | 861.95 | 451 / 459 | 86% | 3.55 | 956 / 1118 |
| ovary | 100% | 1307.71 | 180 / 180 | 84% | 2.02 | 360 / 430 |
| adrenal gland | 98% | 706.45 | 252 / 258 | 81% | 2.52 | 187 / 230 |
| pancreas | 99% | 687.15 | 326 / 328 | 61% | 1.26 | 108 / 178 |
| lung | 98% | 1092.69 | 565 / 578 | 57% | 1.47 | 656 / 1155 |
| uterus | 100% | 2679.95 | 170 / 170 | 37% | 1.12 | 168 / 459 |
| intestine | 96% | 446.31 | 929 / 966 | 35% | 0.61 | 187 / 527 |
| brain | 98% | 872.78 | 2594 / 2642 | 30% | 0.71 | 209 / 705 |
| stomach | 95% | 390.60 | 341 / 359 | 31% | 0.53 | 89 / 286 |
| bladder | 100% | 626.71 | 21 / 21 | 25% | 0.48 | 126 / 504 |
| skin | 88% | 390.40 | 1592 / 1809 | 24% | 0.45 | 111 / 472 |
| esophagus | 81% | 320.16 | 1165 / 1445 | 28% | 0.58 | 51 / 183 |
| spleen | 100% | 785.22 | 241 / 241 | 0% | 0 | 0 / 0 |
| blood vessel | 96% | 450.28 | 1284 / 1335 | 0% | 0 | 0 / 0 |
| adipose | 92% | 428.30 | 1105 / 1204 | 0% | 0 | 0 / 0 |
| liver | 64% | 175.23 | 144 / 226 | 25% | 0.71 | 102 / 406 |
| heart | 71% | 250.20 | 614 / 861 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 27% | 0.52 | 12 / 45 |
| eye | 0% | 0 | 0 / 0 | 15% | 0.29 | 12 / 80 |
| peripheral blood | 14% | 38.17 | 129 / 929 | 0% | 0 | 0 / 0 |
| muscle | 7% | 14.89 | 54 / 803 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 3% | 0.09 | 1 / 29 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0048854 | Biological process | brain morphogenesis |
| GO_0007288 | Biological process | sperm axoneme assembly |
| GO_0060541 | Biological process | respiratory system development |
| GO_0007283 | Biological process | spermatogenesis |
| GO_0048705 | Biological process | skeletal system morphogenesis |
| GO_0003351 | Biological process | epithelial cilium movement involved in extracellular fluid movement |
| GO_0097225 | Cellular component | sperm midpiece |
| GO_0036126 | Cellular component | sperm flagellum |
| GO_0002177 | Cellular component | manchette |
| GO_0005576 | Cellular component | extracellular region |
| GO_0005794 | Cellular component | Golgi apparatus |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0003674 | Molecular function | molecular_function |
| Gene name | SPEF2 |
| Protein name | Sperm flagellar 2 Sperm flagellar protein 2 (Protein KPL2) |
| Synonyms | KIAA1770 KPL2 |
| Description | FUNCTION: Required for correct axoneme development in spermatozoa. Important for normal development of the manchette and sperm head morphology. Essential for male fertility. Plays a role in localization of the intraflagellar transport protein IFT20 to the manchette, suggesting function as an adapter for dynein-mediated protein transport during spermatogenesis . Also plays a role in bone growth where it seems to be required for normal osteoblast differentiation (By similarity). . |
| Accessions | ENST00000508817.1 H0Y989 ENST00000356031.8 [Q9C093-1] ENST00000637569.1 ENST00000440995.6 [Q9C093-2] ENST00000282469.10 [Q9C093-3] D6REZ4 D6RGZ5 H0YAC0 A0A1B0GWC1 H0Y8H6 ENST00000510777.5 Q9C093 ENST00000513078.1 ENST00000637061.1 ENST00000509059.5 A0A1B0GWD8 ENST00000506526.5 |
