Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 3 studies | 17% ± 1% |
Insufficient scRNA-seq data for expression of SPDL1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
uterus | 100% | 550.69 | 170 / 170 | 100% | 17.88 | 458 / 459 |
ovary | 100% | 530.52 | 180 / 180 | 100% | 11.11 | 429 / 430 |
brain | 100% | 623.27 | 2639 / 2642 | 100% | 10.21 | 704 / 705 |
esophagus | 100% | 476.99 | 1439 / 1445 | 100% | 14.50 | 183 / 183 |
breast | 100% | 484.81 | 458 / 459 | 100% | 11.42 | 1115 / 1118 |
bladder | 100% | 367.90 | 21 / 21 | 99% | 10.45 | 497 / 504 |
intestine | 100% | 434.19 | 966 / 966 | 98% | 10.81 | 517 / 527 |
stomach | 98% | 365.13 | 353 / 359 | 99% | 10.67 | 283 / 286 |
prostate | 100% | 357.38 | 244 / 245 | 95% | 4.94 | 479 / 502 |
lung | 94% | 392.89 | 545 / 578 | 100% | 9.90 | 1152 / 1155 |
skin | 100% | 1360.37 | 1800 / 1809 | 94% | 12.23 | 445 / 472 |
thymus | 100% | 382.48 | 652 / 653 | 93% | 5.97 | 565 / 605 |
pancreas | 91% | 199.18 | 300 / 328 | 98% | 7.43 | 175 / 178 |
adrenal gland | 100% | 378.76 | 258 / 258 | 89% | 5.20 | 204 / 230 |
kidney | 98% | 343.34 | 87 / 89 | 90% | 5.72 | 809 / 901 |
liver | 76% | 142.99 | 172 / 226 | 77% | 4.52 | 313 / 406 |
lymph node | 0% | 0 | 0 / 0 | 100% | 16.14 | 29 / 29 |
spleen | 100% | 689.42 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 17.61 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.22 | 1 / 1 |
adipose | 100% | 444.31 | 1200 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 312.47 | 1321 / 1335 | 0% | 0 | 0 / 0 |
muscle | 93% | 190.66 | 747 / 803 | 0% | 0 | 0 / 0 |
heart | 90% | 211.92 | 771 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 61% | 2.91 | 49 / 80 |
peripheral blood | 46% | 688.69 | 423 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0034501 | Biological process | protein localization to kinetochore |
GO_0000132 | Biological process | establishment of mitotic spindle orientation |
GO_0051301 | Biological process | cell division |
GO_0007094 | Biological process | mitotic spindle assembly checkpoint signaling |
GO_0007080 | Biological process | mitotic metaphase chromosome alignment |
GO_0016477 | Biological process | cell migration |
GO_0005813 | Cellular component | centrosome |
GO_0000940 | Cellular component | outer kinetochore |
GO_0005829 | Cellular component | cytosol |
GO_0000922 | Cellular component | spindle pole |
GO_0005634 | Cellular component | nucleus |
GO_0019899 | Molecular function | enzyme binding |
GO_0005515 | Molecular function | protein binding |
GO_0043515 | Molecular function | kinetochore binding |
Gene name | SPDL1 |
Protein name | Spindle apparatus coiled-coil protein 1 Protein Spindly (hSpindly) (Arsenite-related gene 1 protein) (Coiled-coil domain-containing protein 99) (Rhabdomyosarcoma antigen MU-RMS-40.4A) (Spindle apparatus coiled-coil domain-containing protein 1) |
Synonyms | CCDC99 |
Description | FUNCTION: Required for the localization of dynein and dynactin to the mitotic kintochore. Dynein is believed to control the initial lateral interaction between the kinetochore and spindle microtubules and to facilitate the subsequent formation of end-on kinetochore-microtubule attachments mediated by the NDC80 complex. Also required for correct spindle orientation. Does not appear to be required for the removal of spindle assembly checkpoint (SAC) proteins from the kinetochore upon bipolar spindle attachment . Acts as an adapter protein linking the dynein motor complex to various cargos and converts dynein from a non-processive to a highly processive motor in the presence of dynactin. Facilitates the interaction between dynein and dynactin and activates dynein processivity (the ability to move along a microtubule for a long distance without falling off the track) . Plays a role in cell migration . . |
Accessions | ENST00000265295.9 [Q96EA4-1] H7C5V2 ENST00000513941.5 ENST00000515224.5 ENST00000503871.1 Q96EA4 ENST00000507232.5 ENST00000512028.5 D6RDK5 ENST00000508247.5 D6RIB8 ENST00000505977.1 D6REZ1 ENST00000629457.2 D6RIF7 ENST00000506574.5 ENST00000509785.5 H0YBG5 D6RC83 D6R936 D6RCL1 ENST00000513795.1 |