SPATA4 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	6 studies	25% ± 5%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
kidney	99%	43.12	88 / 89	48%	0.97	435 / 901
thymus	100%	46.99	650 / 653	26%	0.50	157 / 605
brain	96%	34.30	2533 / 2642	23%	0.46	165 / 705
adrenal gland	87%	18.67	224 / 258	6%	0.09	14 / 230
breast	60%	12.66	274 / 459	27%	0.56	303 / 1118
muscle	84%	16.56	678 / 803	0%	0	0 / 0
prostate	75%	16.57	183 / 245	8%	0.12	42 / 502
uterus	78%	15.93	133 / 170	3%	0.07	15 / 459
ovary	71%	9.13	128 / 180	10%	0.20	44 / 430
lung	67%	41.10	387 / 578	8%	0.21	97 / 1155
heart	70%	10.92	606 / 861	0%	0	0 / 0
intestine	66%	16.67	640 / 966	1%	0.01	3 / 527
esophagus	61%	11.59	887 / 1445	1%	0.01	2 / 183
bladder	57%	11.86	12 / 21	1%	0.01	4 / 504
stomach	55%	10.21	196 / 359	1%	0.05	4 / 286
blood vessel	51%	5.62	686 / 1335	0%	0	0 / 0
pancreas	44%	4.39	144 / 328	3%	0.10	6 / 178
skin	40%	6.97	719 / 1809	1%	0.01	5 / 472
adipose	29%	2.82	347 / 1204	0%	0	0 / 0
spleen	9%	0.64	22 / 241	0%	0	0 / 0
liver	8%	0.92	17 / 226	0%	0	0 / 406
peripheral blood	2%	0.41	20 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	1%	0.01	1 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1