SPATA20 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
epithelial cell	3 studies	28% ± 8%	Explore
abnormal cell	3 studies	17% ± 1%	Explore
goblet cell	3 studies	19% ± 1%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	100%	10664.26	653 / 653	100%	68.08	604 / 605
prostate	100%	7722.04	245 / 245	100%	74.03	500 / 502
pancreas	100%	3934.66	328 / 328	99%	47.57	177 / 178
kidney	100%	6018.30	89 / 89	99%	61.16	894 / 901
adrenal gland	100%	10498.41	258 / 258	99%	44.38	227 / 230
stomach	100%	5185.67	359 / 359	98%	32.88	281 / 286
intestine	100%	5224.27	966 / 966	98%	35.70	516 / 527
skin	99%	3340.52	1782 / 1809	99%	61.93	467 / 472
bladder	100%	5261.24	21 / 21	97%	41.72	490 / 504
lung	99%	3548.19	570 / 578	98%	41.33	1134 / 1155
ovary	100%	7487.94	180 / 180	96%	32.98	414 / 430
brain	99%	4616.40	2614 / 2642	96%	40.29	676 / 705
uterus	100%	5865.63	170 / 170	95%	33.05	434 / 459
breast	100%	4009.93	458 / 459	95%	48.07	1059 / 1118
liver	98%	3142.97	221 / 226	96%	37.34	390 / 406
esophagus	99%	3590.31	1424 / 1445	95%	30.47	174 / 183
eye	0%	0	0 / 0	100%	133.37	80 / 80
spleen	100%	5526.02	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	45.95	1 / 1
adipose	99%	3443.15	1196 / 1204	0%	0	0 / 0
blood vessel	99%	3391.42	1323 / 1335	0%	0	0 / 0
heart	97%	4182.07	838 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	96%	22.04	43 / 45
lymph node	0%	0	0 / 0	93%	31.16	27 / 29
muscle	88%	2122.33	705 / 803	0%	0	0 / 0
peripheral blood	43%	874.36	397 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0