Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 20 studies | 65% ± 17% | |
deuterosomal cell | 4 studies | 22% ± 7% | |
ependymal cell | 3 studies | 67% ± 12% | |
glutamatergic neuron | 3 studies | 33% ± 4% | |
interneuron | 3 studies | 28% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 32% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 100% | 524.71 | 89 / 89 | 68% | 2.40 | 616 / 901 |
thymus | 97% | 350.70 | 633 / 653 | 25% | 0.44 | 149 / 605 |
lung | 66% | 650.76 | 379 / 578 | 48% | 1.65 | 557 / 1155 |
breast | 64% | 183.59 | 294 / 459 | 39% | 1.71 | 440 / 1118 |
esophagus | 57% | 527.64 | 822 / 1445 | 42% | 1.62 | 76 / 183 |
pancreas | 57% | 68.55 | 187 / 328 | 24% | 0.48 | 43 / 178 |
bladder | 43% | 79.57 | 9 / 21 | 37% | 1.48 | 187 / 504 |
ovary | 31% | 40.99 | 56 / 180 | 48% | 1.26 | 205 / 430 |
uterus | 15% | 167.52 | 26 / 170 | 52% | 2.04 | 240 / 459 |
tonsil | 0% | 0 | 0 / 0 | 56% | 2.56 | 25 / 45 |
brain | 35% | 212.00 | 925 / 2642 | 7% | 0.37 | 51 / 705 |
skin | 33% | 43.62 | 606 / 1809 | 4% | 0.10 | 18 / 472 |
adrenal gland | 32% | 30.26 | 82 / 258 | 4% | 0.08 | 9 / 230 |
adipose | 27% | 56.55 | 331 / 1204 | 0% | 0 | 0 / 0 |
prostate | 21% | 27.85 | 52 / 245 | 2% | 0.13 | 12 / 502 |
stomach | 6% | 9.18 | 22 / 359 | 3% | 0.05 | 9 / 286 |
liver | 1% | 0.71 | 2 / 226 | 5% | 0.13 | 20 / 406 |
intestine | 1% | 0.58 | 6 / 966 | 5% | 0.18 | 24 / 527 |
muscle | 3% | 3.49 | 22 / 803 | 0% | 0 | 0 / 0 |
spleen | 2% | 2.20 | 6 / 241 | 0% | 0 | 0 / 0 |
heart | 1% | 1.08 | 9 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 0.28 | 4 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.92 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_1904158 | Biological process | axonemal central apparatus assembly |
GO_1990953 | Biological process | intramanchette transport |
GO_1905198 | Biological process | manchette assembly |
GO_0007283 | Biological process | spermatogenesis |
GO_0003351 | Biological process | epithelial cilium movement involved in extracellular fluid movement |
GO_0044458 | Biological process | motile cilium assembly |
GO_1990716 | Cellular component | axonemal central apparatus |
GO_0031514 | Cellular component | motile cilium |
GO_0001669 | Cellular component | acrosomal vesicle |
GO_0002177 | Cellular component | manchette |
GO_0005576 | Cellular component | extracellular region |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005874 | Cellular component | microtubule |
Gene name | SPAG17 |
Protein name | Sperm-associated antigen 17 (Projection protein PF6 homolog) Sperm associated antigen 17 |
Synonyms | |
Description | FUNCTION: Component of the central pair apparatus of ciliary axonemes. Plays a critical role in the function and structure of motile cilia. May play a role in endochondral bone formation, most likely because of a function in primary cilia of chondrocytes and osteoblasts (By similarity). Essential for normal spermatogenesis and male fertility (By similarity). Required for normal manchette structure, transport of proteins along the manchette microtubules and formation of the sperm head and flagellum (By similarity). Essential for sperm flagellum development and proper assembly of the respiratory motile cilia central pair apparatus, but not the brain ependymal cilia (By similarity). . |
Accessions | Q5TDG6 ENST00000437255.1 E0ZS55 A7LBF9 Q6Q759 ENST00000336338.10 |