SPACA6 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
astrocyte	3 studies	22% ± 5%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	3 studies	17% ± 2%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
ovary	100%	1258.44	180 / 180	99%	6.62	427 / 430
adrenal gland	100%	849.90	258 / 258	99%	5.87	228 / 230
brain	100%	666.58	2634 / 2642	99%	5.66	700 / 705
thymus	100%	748.97	652 / 653	99%	7.86	597 / 605
prostate	100%	953.14	245 / 245	98%	3.62	494 / 502
breast	100%	414.83	457 / 459	93%	3.62	1041 / 1118
uterus	100%	1221.79	170 / 170	92%	5.46	423 / 459
kidney	100%	585.30	89 / 89	88%	3.15	793 / 901
bladder	100%	630.86	21 / 21	84%	4.06	425 / 504
lung	99%	499.78	574 / 578	80%	2.41	922 / 1155
esophagus	91%	597.51	1313 / 1445	64%	1.69	117 / 183
skin	81%	181.66	1457 / 1809	69%	2.01	326 / 472
pancreas	51%	94.86	167 / 328	94%	4.49	167 / 178
stomach	84%	318.60	302 / 359	60%	1.30	172 / 286
intestine	90%	544.74	866 / 966	54%	1.19	285 / 527
spleen	100%	577.40	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	17.38	1 / 1
blood vessel	100%	710.63	1332 / 1335	0%	0	0 / 0
adipose	98%	379.10	1178 / 1204	0%	0	0 / 0
heart	97%	300.52	837 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	72%	1.10	21 / 29
tonsil	0%	0	0 / 0	60%	1.45	27 / 45
eye	0%	0	0 / 0	59%	1.24	47 / 80
peripheral blood	50%	112.76	463 / 929	0%	0	0 / 0
liver	13%	21.32	29 / 226	26%	1.01	105 / 406
muscle	6%	9.13	46 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0