I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| epithelial cell | 4 studies | 23% ± 8% | |
| fibroblast | 3 studies | 22% ± 6% | |
| dendritic cell | 3 studies | 19% ± 0% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| epithelial cell | 4 studies | 23% ± 8% | |
| fibroblast | 3 studies | 22% ± 6% | |
| dendritic cell | 3 studies | 19% ± 0% |
Insufficient scRNA-seq data for expression of SNUPN at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 939.71 | 1445 / 1445 | 100% | 7.58 | 183 / 183 |
| ovary | 100% | 1350.32 | 180 / 180 | 100% | 12.14 | 430 / 430 |
| stomach | 100% | 835.12 | 359 / 359 | 100% | 8.36 | 286 / 286 |
| lung | 100% | 948.49 | 577 / 578 | 100% | 9.19 | 1155 / 1155 |
| intestine | 100% | 1104.65 | 966 / 966 | 100% | 9.00 | 526 / 527 |
| brain | 100% | 921.46 | 2639 / 2642 | 100% | 9.29 | 703 / 705 |
| prostate | 100% | 1105.73 | 245 / 245 | 100% | 9.33 | 500 / 502 |
| uterus | 100% | 1334.46 | 170 / 170 | 100% | 9.81 | 457 / 459 |
| breast | 100% | 1242.60 | 459 / 459 | 99% | 10.49 | 1112 / 1118 |
| thymus | 100% | 1291.66 | 653 / 653 | 99% | 10.13 | 601 / 605 |
| skin | 100% | 1074.30 | 1809 / 1809 | 99% | 11.38 | 467 / 472 |
| bladder | 100% | 1221.14 | 21 / 21 | 99% | 8.13 | 498 / 504 |
| kidney | 100% | 1022.35 | 89 / 89 | 98% | 7.41 | 883 / 901 |
| pancreas | 99% | 475.42 | 325 / 328 | 99% | 7.60 | 176 / 178 |
| liver | 100% | 670.96 | 226 / 226 | 98% | 5.68 | 397 / 406 |
| adrenal gland | 100% | 1035.22 | 258 / 258 | 91% | 5.57 | 210 / 230 |
| adipose | 100% | 1137.97 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 9.78 | 29 / 29 |
| spleen | 100% | 1148.85 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 7.98 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 3.61 | 1 / 1 |
| blood vessel | 100% | 969.28 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| muscle | 100% | 1032.67 | 802 / 803 | 0% | 0 | 0 / 0 |
| heart | 98% | 712.64 | 843 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 96% | 7.29 | 77 / 80 |
| peripheral blood | 89% | 660.90 | 824 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0006606 | Biological process | protein import into nucleus |
| GO_0061015 | Biological process | snRNA import into nucleus |
| GO_0006404 | Biological process | RNA import into nucleus |
| GO_0042564 | Cellular component | NLS-dependent protein nuclear import complex |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0005829 | Cellular component | cytosol |
| GO_0005643 | Cellular component | nuclear pore |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0000339 | Molecular function | RNA cap binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0061608 | Molecular function | nuclear import signal receptor activity |
| Gene name | SNUPN |
| Protein name | RNA U transporter 1 Snurportin-1 Snurportin 1 Snurportin-1 (RNA U transporter 1) |
| Synonyms | RNUT1 SPN1 |
| Description | FUNCTION: Functions as an U snRNP-specific nuclear import adapter. Involved in the trimethylguanosine (m3G)-cap-dependent nuclear import of U snRNPs. Binds specifically to the terminal m3G-cap U snRNAs. . FUNCTION: Functions as an U snRNP-specific nuclear import adapter. Involved in the trimethylguanosine (m3G)-cap-dependent nuclear import of U snRNPs. Binds specifically to the terminal m3G-cap U snRNAs. . FUNCTION: Functions as an U snRNP-specific nuclear import adapter. Involved in the trimethylguanosine (m3G)-cap-dependent nuclear import of U snRNPs. Binds specifically to the terminal m3G-cap U snRNAs. . |
| Accessions | ENST00000564086.5 ENST00000308588.10 ENST00000569817.5 O95149 ENST00000568078.5 H3BRI5 ENST00000564644.5 H3BQR0 ENST00000563793.1 H3BTA6 ENST00000568162.5 H3BUB4 ENST00000567134.5 H3BSK1 ENST00000564675.5 |
