Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 20 studies | 71% ± 20% | |
deuterosomal cell | 3 studies | 26% ± 5% |
Insufficient scRNA-seq data for expression of SNTN at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 91% | 489.35 | 528 / 578 | 35% | 2.50 | 407 / 1155 |
stomach | 65% | 9.54 | 233 / 359 | 1% | 0.01 | 2 / 286 |
pancreas | 54% | 4.86 | 177 / 328 | 2% | 0.10 | 3 / 178 |
prostate | 35% | 4.66 | 85 / 245 | 12% | 0.63 | 62 / 502 |
ovary | 16% | 4.79 | 29 / 180 | 16% | 1.41 | 70 / 430 |
uterus | 22% | 96.82 | 38 / 170 | 7% | 0.72 | 30 / 459 |
intestine | 25% | 2.67 | 243 / 966 | 1% | 0.01 | 4 / 527 |
brain | 23% | 5.50 | 616 / 2642 | 1% | 0.03 | 5 / 705 |
breast | 12% | 0.80 | 54 / 459 | 8% | 0.29 | 85 / 1118 |
bladder | 14% | 0.95 | 3 / 21 | 3% | 0.13 | 17 / 504 |
skin | 12% | 0.91 | 216 / 1809 | 0% | 0.02 | 2 / 472 |
thymus | 10% | 0.61 | 66 / 653 | 1% | 0.03 | 7 / 605 |
kidney | 9% | 1.99 | 8 / 89 | 0% | 0 | 0 / 901 |
esophagus | 2% | 0.13 | 27 / 1445 | 1% | 0.01 | 1 / 183 |
adipose | 2% | 0.28 | 28 / 1204 | 0% | 0 | 0 / 0 |
liver | 2% | 0.07 | 4 / 226 | 0% | 0 | 0 / 406 |
blood vessel | 2% | 0.21 | 23 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 2% | 1.85 | 15 / 929 | 0% | 0 | 0 / 0 |
adrenal gland | 2% | 0.08 | 4 / 258 | 0% | 0 | 0 / 230 |
muscle | 1% | 0.05 | 7 / 803 | 0% | 0 | 0 / 0 |
heart | 1% | 0.06 | 7 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0005929 | Cellular component | cilium |
GO_0005509 | Molecular function | calcium ion binding |
GO_0048306 | Molecular function | calcium-dependent protein binding |
GO_0046914 | Molecular function | transition metal ion binding |
Gene name | SNTN |
Protein name | Sentan (Protein S100-A1-like) (S100 calcium-binding protein A1-like) Sentan, cilia apical structure protein |
Synonyms | S100A1L |
Description | FUNCTION: May be a component of the linker structure that bridges the ciliary membrane and peripheral singlet microtubules. . |
Accessions | ENST00000496807.1 ENST00000469440.5 A6NMZ2 C9JXY5 C9JRU3 ENST00000343837.8 |