SMIM27 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
natural killer cell	6 studies	17% ± 1%	Explore
ciliated cell	6 studies	26% ± 11%	Explore
CD4-positive, alpha-beta T cell	5 studies	18% ± 2%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	4 studies	19% ± 2%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	4 studies	19% ± 3%	Explore
B cell	4 studies	17% ± 2%	Explore
CD8-positive, alpha-beta T cell	4 studies	18% ± 2%	Explore
gamma-delta T cell	3 studies	25% ± 8%	Explore
epithelial cell	3 studies	34% ± 8%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	4 studies	18% ± 1%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	207.37	2639 / 2642	99%	3.13	700 / 705
thymus	100%	167.02	653 / 653	99%	3.21	599 / 605
prostate	100%	142.15	244 / 245	98%	2.06	494 / 502
uterus	100%	113.51	170 / 170	93%	1.97	428 / 459
adrenal gland	100%	215.33	258 / 258	93%	2.14	214 / 230
breast	100%	133.08	458 / 459	92%	1.86	1029 / 1118
kidney	100%	196.94	89 / 89	88%	1.62	796 / 901
lung	99%	130.49	573 / 578	87%	1.69	1007 / 1155
bladder	100%	123.90	21 / 21	83%	1.63	420 / 504
pancreas	100%	95.61	327 / 328	83%	1.51	147 / 178
ovary	99%	111.08	179 / 180	80%	1.48	342 / 430
stomach	100%	121.18	359 / 359	75%	1.20	214 / 286
intestine	100%	133.35	966 / 966	75%	1.26	394 / 527
skin	100%	130.17	1805 / 1809	75%	1.35	353 / 472
esophagus	100%	121.49	1443 / 1445	66%	1.09	120 / 183
liver	93%	58.90	210 / 226	63%	1.02	254 / 406
lymph node	0%	0	0 / 0	100%	4.17	29 / 29
spleen	100%	221.50	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	1.73	1 / 1
adipose	100%	122.82	1198 / 1204	0%	0	0 / 0
blood vessel	99%	133.49	1325 / 1335	0%	0	0 / 0
muscle	99%	140.68	795 / 803	0%	0	0 / 0
peripheral blood	99%	190.55	917 / 929	0%	0	0 / 0
heart	99%	125.70	849 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	84%	1.55	38 / 45
eye	0%	0	0 / 0	68%	1.03	54 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0