Insufficient scRNA-seq data for expression of SMCP at single-cell level.
Insufficient scRNA-seq data for expression of SMCP at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 34% | 8.00 | 907 / 2642 | 37% | 2.45 | 258 / 705 |
ovary | 59% | 4.27 | 107 / 180 | 1% | 0.02 | 4 / 430 |
bladder | 48% | 3.71 | 10 / 21 | 3% | 0.39 | 17 / 504 |
prostate | 47% | 24.49 | 114 / 245 | 0% | 0 | 0 / 502 |
adrenal gland | 36% | 3.32 | 93 / 258 | 6% | 0.39 | 13 / 230 |
liver | 35% | 3.50 | 79 / 226 | 0% | 0 | 0 / 406 |
skin | 30% | 4.13 | 548 / 1809 | 2% | 0.36 | 8 / 472 |
esophagus | 30% | 4.39 | 436 / 1445 | 2% | 0.16 | 3 / 183 |
stomach | 30% | 2.91 | 109 / 359 | 1% | 0.01 | 2 / 286 |
intestine | 29% | 3.69 | 282 / 966 | 0% | 0.00 | 1 / 527 |
uterus | 25% | 2.32 | 42 / 170 | 5% | 0.45 | 21 / 459 |
lung | 23% | 2.25 | 133 / 578 | 6% | 0.49 | 69 / 1155 |
pancreas | 29% | 2.06 | 94 / 328 | 0% | 0 | 0 / 178 |
spleen | 27% | 1.55 | 66 / 241 | 0% | 0 | 0 / 0 |
thymus | 25% | 7.39 | 164 / 653 | 0% | 0.00 | 1 / 605 |
kidney | 22% | 2.30 | 20 / 89 | 0% | 0.00 | 3 / 901 |
breast | 21% | 16.14 | 98 / 459 | 0% | 0.01 | 4 / 1118 |
blood vessel | 19% | 1.90 | 256 / 1335 | 0% | 0 | 0 / 0 |
adipose | 19% | 3.04 | 228 / 1204 | 0% | 0 | 0 / 0 |
heart | 19% | 1.33 | 163 / 861 | 0% | 0 | 0 / 0 |
muscle | 15% | 5.22 | 121 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 15% | 1.11 | 138 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.21 | 1 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0030317 | Biological process | flagellated sperm motility |
GO_0007341 | Biological process | penetration of zona pellucida |
GO_0031966 | Cellular component | mitochondrial membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005739 | Cellular component | mitochondrion |
GO_0005515 | Molecular function | protein binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | SMCP |
Protein name | Sperm mitochondrial-associated cysteine-rich protein Sperm mitochondria-associated cysteine-rich protein (Testicular tissue protein Li 119) (Testicular tissue protein Li 161) (cDNA, FLJ92296, Homo sapiens mitochondrial capsule selenoprotein (MCSP), nucleargene encoding mitochondrial protein, mRNA) |
Synonyms | MCS hCG_1744473 MCSP |
Description | FUNCTION: Involved in sperm motility. Its absence is associated with genetic background dependent male infertility. Infertility may be due to reduced sperm motility in the female reproductive tract and inability to penetrate the oocyte zona pellucida (By similarity). . |
Accessions | Q5T7P5 P49901 ENST00000368765.4 |