Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 5 studies | 22% ± 7% | |
basal cell | 4 studies | 21% ± 8% | |
OFF-bipolar cell | 3 studies | 26% ± 9% | |
glial cell | 3 studies | 33% ± 22% |
Insufficient scRNA-seq data for expression of SLITRK6 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 2565.90 | 21 / 21 | 66% | 43.07 | 333 / 504 |
prostate | 93% | 683.19 | 229 / 245 | 51% | 4.33 | 256 / 502 |
esophagus | 96% | 431.03 | 1391 / 1445 | 47% | 15.51 | 86 / 183 |
lung | 70% | 215.76 | 403 / 578 | 56% | 15.09 | 645 / 1155 |
breast | 57% | 138.00 | 263 / 459 | 68% | 76.43 | 761 / 1118 |
intestine | 86% | 453.46 | 826 / 966 | 32% | 8.09 | 168 / 527 |
ureter | 0% | 0 | 0 / 0 | 100% | 19.38 | 1 / 1 |
skin | 72% | 358.30 | 1297 / 1809 | 20% | 5.53 | 93 / 472 |
stomach | 51% | 95.36 | 182 / 359 | 15% | 2.17 | 44 / 286 |
uterus | 18% | 20.14 | 30 / 170 | 42% | 14.41 | 191 / 459 |
thymus | 42% | 71.04 | 272 / 653 | 10% | 1.72 | 60 / 605 |
heart | 46% | 116.78 | 396 / 861 | 0% | 0 | 0 / 0 |
brain | 44% | 127.13 | 1162 / 2642 | 1% | 0.05 | 9 / 705 |
pancreas | 4% | 4.69 | 12 / 328 | 37% | 6.65 | 65 / 178 |
liver | 32% | 40.98 | 72 / 226 | 1% | 0.10 | 3 / 406 |
ovary | 3% | 3.12 | 5 / 180 | 22% | 2.01 | 94 / 430 |
tonsil | 0% | 0 | 0 / 0 | 24% | 2.93 | 11 / 45 |
adrenal gland | 7% | 8.34 | 19 / 258 | 15% | 2.02 | 35 / 230 |
blood vessel | 19% | 29.47 | 259 / 1335 | 0% | 0 | 0 / 0 |
adipose | 19% | 22.58 | 225 / 1204 | 0% | 0 | 0 / 0 |
kidney | 4% | 3.96 | 4 / 89 | 4% | 0.86 | 38 / 901 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.12 | 1 / 29 |
eye | 0% | 0 | 0 / 0 | 1% | 0.04 | 1 / 80 |
spleen | 1% | 0.54 | 2 / 241 | 0% | 0 | 0 / 0 |
muscle | 0% | 0.57 | 3 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.17 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007409 | Biological process | axonogenesis |
GO_0008344 | Biological process | adult locomotory behavior |
GO_0002088 | Biological process | lens development in camera-type eye |
GO_0001964 | Biological process | startle response |
GO_0007601 | Biological process | visual perception |
GO_0007605 | Biological process | sensory perception of sound |
GO_0035264 | Biological process | multicellular organism growth |
GO_0007416 | Biological process | synapse assembly |
GO_0031223 | Biological process | auditory behavior |
GO_0090102 | Biological process | cochlea development |
GO_1905606 | Biological process | regulation of presynapse assembly |
GO_0051965 | Biological process | positive regulation of synapse assembly |
GO_0060384 | Biological process | innervation |
GO_0060007 | Biological process | linear vestibuloocular reflex |
GO_0021562 | Biological process | vestibulocochlear nerve development |
GO_0002093 | Biological process | auditory receptor cell morphogenesis |
GO_0009986 | Cellular component | cell surface |
GO_0005886 | Cellular component | plasma membrane |
Gene name | SLITRK6 |
Protein name | SLIT and NTRK-like protein 6 |
Synonyms | |
Description | FUNCTION: Regulator of neurite outgrowth required for normal hearing and vision. . |
Accessions | ENST00000643778.1 Q9H5Y7 ENST00000647374.2 |