Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 8 studies | 33% ± 16% | |
neuron | 4 studies | 26% ± 10% | |
GABAergic neuron | 4 studies | 37% ± 12% | |
interneuron | 4 studies | 38% ± 22% | |
retina horizontal cell | 3 studies | 18% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 6 studies | 32% ± 15% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 5815.75 | 2642 / 2642 | 100% | 23.97 | 705 / 705 |
esophagus | 100% | 1230.61 | 1442 / 1445 | 100% | 9.11 | 183 / 183 |
intestine | 100% | 1308.87 | 966 / 966 | 99% | 6.35 | 522 / 527 |
thymus | 100% | 1174.50 | 651 / 653 | 99% | 7.56 | 601 / 605 |
uterus | 100% | 1431.49 | 170 / 170 | 99% | 8.67 | 453 / 459 |
lung | 99% | 1210.21 | 571 / 578 | 100% | 7.78 | 1151 / 1155 |
bladder | 100% | 1169.57 | 21 / 21 | 98% | 6.83 | 496 / 504 |
adrenal gland | 99% | 1271.87 | 256 / 258 | 99% | 13.94 | 227 / 230 |
ovary | 100% | 1316.56 | 180 / 180 | 98% | 5.78 | 420 / 430 |
skin | 100% | 1556.18 | 1804 / 1809 | 98% | 8.76 | 462 / 472 |
stomach | 94% | 847.50 | 337 / 359 | 98% | 6.49 | 280 / 286 |
kidney | 88% | 708.87 | 78 / 89 | 98% | 6.74 | 884 / 901 |
breast | 99% | 1015.25 | 456 / 459 | 80% | 4.12 | 895 / 1118 |
prostate | 92% | 738.40 | 225 / 245 | 83% | 3.11 | 417 / 502 |
pancreas | 58% | 323.94 | 189 / 328 | 99% | 6.63 | 176 / 178 |
liver | 55% | 305.24 | 125 / 226 | 81% | 3.61 | 329 / 406 |
lymph node | 0% | 0 | 0 / 0 | 100% | 6.03 | 29 / 29 |
spleen | 100% | 960.48 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 8.95 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.72 | 1 / 1 |
blood vessel | 100% | 1791.45 | 1333 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 1139.22 | 1199 / 1204 | 0% | 0 | 0 / 0 |
muscle | 99% | 1177.14 | 797 / 803 | 0% | 0 | 0 / 0 |
heart | 90% | 1070.60 | 779 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 89% | 4.65 | 71 / 80 |
peripheral blood | 68% | 735.92 | 630 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0030010 | Biological process | establishment of cell polarity |
GO_0097484 | Biological process | dendrite extension |
GO_0006811 | Biological process | monoatomic ion transport |
GO_0071805 | Biological process | potassium ion transmembrane transport |
GO_0048812 | Biological process | neuron projection morphogenesis |
GO_0098719 | Biological process | sodium ion import across plasma membrane |
GO_0048675 | Biological process | axon extension |
GO_0051453 | Biological process | regulation of intracellular pH |
GO_1902600 | Biological process | proton transmembrane transport |
GO_0031902 | Cellular component | late endosome membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0055037 | Cellular component | recycling endosome |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0031901 | Cellular component | early endosome membrane |
GO_0055038 | Cellular component | recycling endosome membrane |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0015385 | Molecular function | sodium:proton antiporter activity |
GO_0015386 | Molecular function | potassium:proton antiporter activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
Gene name | SLC9A6 |
Protein name | Sodium/hydrogen exchanger 6 (Na(+)/H(+) exchanger 6) (NHE-6) (Solute carrier family 9 member 6) Sodium/hydrogen exchanger Solute carrier family 9 member A6 |
Synonyms | NHE6 KIAA0267 |
Description | FUNCTION: Endosomal Na(+), K(+)/H(+) antiporter . Mediates the electroneutral exchange of endosomal luminal H(+) for a cytosolic Na(+) or K(+). By facilitating proton efflux, SLC9A6 counteracts the acidity generated by vacuolar (V)-ATPase, thereby limiting luminal acidification. Responsible for alkalizing and maintaining the endosomal pH, and consequently in, e.g., endosome maturation and trafficking of recycling endosomal cargo . Plays a critical role during neurodevelopment by regulating synaptic development and plasticity (By similarity). Implicated in the maintenance of cell polarity in a manner that is dependent on its ability to modulate intravesicular pH . Regulates intracelular pH in some specialized cells, osteoclasts and stereocilia where this transporter localizes to the plasma membrane (By similarity). . |
Accessions | ENST00000674809.1 A0A6Q8PGY5 A0A1B0GV11 ENST00000637195.1 ENST00000370698.7 [Q92581-1] ENST00000630721.3 ENST00000676043.1 A0A0D9SFM4 ENST00000636092.1 [Q92581-3] ENST00000370701.6 [Q92581-3] A0A1B0GTT2 ENST00000637234.1 [Q92581-3] ENST00000678163.1 ENST00000637581.1 [Q92581-3] ENST00000627534.2 A0A6Q8PFS7 Q92581 A0A7I2V2B0 ENST00000638078.1 A0A0D9SGH0 ENST00000636347.1 [Q92581-3] ENST00000370695.8 [Q92581-2] |