Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 14 studies | 25% ± 10% | |
epithelial cell of proximal tubule | 6 studies | 27% ± 6% | |
myeloid cell | 5 studies | 21% ± 6% | |
pancreatic A cell | 4 studies | 51% ± 27% | |
endothelial cell | 4 studies | 28% ± 6% | |
glutamatergic neuron | 4 studies | 38% ± 14% | |
epithelial cell | 4 studies | 27% ± 7% | |
GABAergic neuron | 4 studies | 42% ± 13% | |
type B pancreatic cell | 3 studies | 50% ± 20% | |
retinal pigment epithelial cell | 3 studies | 49% ± 13% | |
interneuron | 3 studies | 34% ± 4% | |
podocyte | 3 studies | 38% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 6454.96 | 245 / 245 | 98% | 101.07 | 494 / 502 |
thymus | 100% | 5890.60 | 653 / 653 | 94% | 69.92 | 571 / 605 |
ovary | 100% | 13296.72 | 180 / 180 | 86% | 40.80 | 371 / 430 |
breast | 99% | 5675.69 | 453 / 459 | 84% | 92.51 | 942 / 1118 |
skin | 89% | 4374.84 | 1610 / 1809 | 89% | 81.93 | 420 / 472 |
esophagus | 98% | 4688.74 | 1411 / 1445 | 79% | 100.78 | 145 / 183 |
pancreas | 93% | 2058.81 | 306 / 328 | 81% | 38.80 | 145 / 178 |
uterus | 100% | 10705.68 | 170 / 170 | 74% | 40.74 | 341 / 459 |
stomach | 99% | 5468.94 | 355 / 359 | 70% | 29.96 | 200 / 286 |
adrenal gland | 99% | 2741.53 | 255 / 258 | 69% | 24.77 | 158 / 230 |
lung | 95% | 3107.02 | 550 / 578 | 71% | 64.57 | 817 / 1155 |
intestine | 81% | 2113.67 | 783 / 966 | 79% | 33.20 | 415 / 527 |
bladder | 90% | 5384.90 | 19 / 21 | 67% | 33.03 | 340 / 504 |
kidney | 100% | 10594.63 | 89 / 89 | 31% | 14.67 | 280 / 901 |
brain | 80% | 2066.61 | 2119 / 2642 | 43% | 10.70 | 301 / 705 |
eye | 0% | 0 | 0 / 0 | 100% | 615.58 | 80 / 80 |
ureter | 0% | 0 | 0 / 0 | 100% | 14.70 | 1 / 1 |
blood vessel | 99% | 4108.42 | 1318 / 1335 | 0% | 0 | 0 / 0 |
adipose | 97% | 4699.07 | 1165 / 1204 | 0% | 0 | 0 / 0 |
spleen | 96% | 4537.57 | 232 / 241 | 0% | 0 | 0 / 0 |
muscle | 93% | 6043.85 | 745 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 87% | 47.91 | 39 / 45 |
heart | 50% | 775.53 | 434 / 861 | 0% | 0 | 0 / 0 |
liver | 12% | 170.08 | 27 / 226 | 5% | 1.44 | 19 / 406 |
lymph node | 0% | 0 | 0 / 0 | 7% | 1.11 | 2 / 29 |
peripheral blood | 2% | 26.72 | 17 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0070327 | Biological process | thyroid hormone transport |
GO_0150104 | Biological process | transport across blood-brain barrier |
GO_0015804 | Biological process | neutral amino acid transport |
GO_0089718 | Biological process | amino acid import across plasma membrane |
GO_0015829 | Biological process | valine transport |
GO_0015816 | Biological process | glycine transport |
GO_0003333 | Biological process | amino acid transmembrane transport |
GO_0006865 | Biological process | amino acid transport |
GO_0035524 | Biological process | proline transmembrane transport |
GO_1903801 | Biological process | L-leucine import across plasma membrane |
GO_1904273 | Biological process | L-alanine import across plasma membrane |
GO_0015827 | Biological process | tryptophan transport |
GO_0015820 | Biological process | L-leucine transport |
GO_0016323 | Cellular component | basolateral plasma membrane |
GO_0016324 | Cellular component | apical plasma membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0031528 | Cellular component | microvillus membrane |
GO_0009925 | Cellular component | basal plasma membrane |
GO_0015171 | Molecular function | amino acid transmembrane transporter activity |
GO_0015179 | Molecular function | L-amino acid transmembrane transporter activity |
GO_0015349 | Molecular function | thyroid hormone transmembrane transporter activity |
GO_0015101 | Molecular function | organic cation transmembrane transporter activity |
GO_0015180 | Molecular function | L-alanine transmembrane transporter activity |
GO_0015297 | Molecular function | antiporter activity |
GO_0019534 | Molecular function | toxin transmembrane transporter activity |
GO_0015175 | Molecular function | neutral L-amino acid transmembrane transporter activity |
GO_0042605 | Molecular function | peptide antigen binding |
GO_0015187 | Molecular function | glycine transmembrane transporter activity |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0005515 | Molecular function | protein binding |
GO_0015190 | Molecular function | L-leucine transmembrane transporter activity |
Gene name | SLC7A8 |
Protein name | Large neutral amino acids transporter small subunit 2 (L-type amino acid transporter 2) (hLAT2) (Solute carrier family 7 member 8) Solute carrier family 7 member 8 |
Synonyms | LAT2 |
Description | FUNCTION: Associates with SLC3A2 to form a functional heterodimeric complex that translocates small and large neutral amino acids with broad specificity and a stoichiometry of 1:1. Functions as amino acid antiporter mediating the influx of extracellular essential amino acids mainly in exchange with the efflux of highly concentrated intracellular amino acids . Has relatively symmetrical selectivities but strongly asymmetrical substrate affinities at both the intracellular and extracellular sides of the transporter . This asymmetry allows SLC7A8 to regulate intracellular amino acid pools (mM concentrations) by exchange with external amino acids (uM concentration range), equilibrating the relative concentrations of different amino acids across the plasma membrane instead of mediating their net uptake . May play an essential role in the reabsorption of neutral amino acids from the epithelial cells to the bloodstream in the kidney . Involved in the uptake of methylmercury (MeHg) when administered as the L-cysteine or D,L-homocysteine complexes, and hence plays a role in metal ion homeostasis and toxicity . Involved in the cellular activity of small molecular weight nitrosothiols, via the stereoselective transport of L-nitrosocysteine (L-CNSO) across the transmembrane . Imports the thyroid hormone diiodothyronine (T2) and to a smaller extent triiodothyronine (T3) but not rT 3 or thyroxine (T4) (By similarity). Mediates the uptake of L-DOPA (By similarity). May participate in auditory function (By similarity). . |
Accessions | ENST00000422941.6 [Q9UHI5-3] ENST00000529705.6 [Q9UHI5-4] E9PIC3 ENST00000524758.1 E9PQT4 ENST00000528860.5 Q9UHI5 ENST00000525062.1 ENST00000339733.9 ENST00000453702.5 [Q9UHI5-2] ENST00000316902.12 [Q9UHI5-1] H0Y2X7 ENST00000469263.5 E9PS92 E9PLV9 |