SLC6A9 | OmnibusX

Name	Number of supported studies	Average coverage
glycinergic amacrine cell	3 studies	42% ± 12%	Explore
amacrine cell	3 studies	30% ± 16%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of SLC6A9 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	96%	1803.45	2539 / 2642	99%	55.90	697 / 705
lung	99%	1689.24	573 / 578	93%	13.21	1072 / 1155
uterus	98%	1452.59	166 / 170	94%	18.83	430 / 459
esophagus	91%	1787.38	1313 / 1445	97%	20.75	177 / 183
intestine	93%	1370.80	903 / 966	88%	10.49	466 / 527
bladder	90%	1685.38	19 / 21	78%	10.06	393 / 504
breast	74%	654.56	341 / 459	93%	20.30	1037 / 1118
stomach	77%	766.68	276 / 359	89%	11.21	255 / 286
adrenal gland	100%	4167.98	257 / 258	48%	11.74	110 / 230
skin	94%	4512.16	1708 / 1809	52%	5.80	246 / 472
thymus	87%	808.96	569 / 653	46%	4.33	277 / 605
ovary	36%	276.48	64 / 180	96%	20.35	412 / 430
prostate	76%	565.16	186 / 245	35%	1.93	177 / 502
pancreas	49%	347.99	160 / 328	60%	4.62	107 / 178
tonsil	0%	0	0 / 0	100%	24.81	45 / 45
kidney	39%	274.45	35 / 89	36%	2.48	328 / 901
blood vessel	65%	560.31	868 / 1335	0%	0	0 / 0
adipose	58%	436.50	703 / 1204	0%	0	0 / 0
liver	14%	113.12	32 / 226	24%	2.54	99 / 406
peripheral blood	24%	172.29	224 / 929	0%	0	0 / 0
spleen	20%	119.22	49 / 241	0%	0	0 / 0
eye	0%	0	0 / 0	16%	1.57	13 / 80
heart	10%	60.07	88 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	7%	0.32	2 / 29
muscle	1%	5.09	7 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0070455	Biological process	positive regulation of heme biosynthetic process
GO_0060092	Biological process	regulation of synaptic transmission, glycinergic
GO_0150104	Biological process	transport across blood-brain barrier
GO_1903804	Biological process	glycine import across plasma membrane
GO_0060012	Biological process	synaptic transmission, glycinergic
GO_0015816	Biological process	glycine transport
GO_0006836	Biological process	neurotransmitter transport
GO_1904782	Biological process	negative regulation of NMDA glutamate receptor activity
GO_0046985	Biological process	positive regulation of hemoglobin biosynthetic process
GO_0035725	Biological process	sodium ion transmembrane transport
GO_0016324	Cellular component	apical plasma membrane
GO_0005886	Cellular component	plasma membrane
GO_0016020	Cellular component	membrane
GO_0030672	Cellular component	synaptic vesicle membrane
GO_0098686	Cellular component	hippocampal mossy fiber to CA3 synapse
GO_0009925	Cellular component	basal plasma membrane
GO_0042734	Cellular component	presynaptic membrane
GO_0031045	Cellular component	dense core granule
GO_0014069	Cellular component	postsynaptic density
GO_0016328	Cellular component	lateral plasma membrane
GO_0045211	Cellular component	postsynaptic membrane
GO_0005768	Cellular component	endosome
GO_0098688	Cellular component	parallel fiber to Purkinje cell synapse
GO_0016323	Cellular component	basolateral plasma membrane
GO_0015187	Molecular function	glycine transmembrane transporter activity
GO_0015375	Molecular function	glycine:sodium symporter activity

Gene name	SLC6A9
Protein name	Sodium- and chloride-dependent glycine transporter 1 (Solute carrier family 6 member 9) Transporter Sodium- and chloride-dependent glycine transporter 1 (GlyT-1) (GlyT1) (Solute carrier family 6 member 9)
Synonyms
Description	FUNCTION: Sodium- and chloride-dependent glycine transporter . Essential for regulating glycine concentrations at inhibitory glycinergic synapses. .; FUNCTION: [Isoform GlyT-1B]: Sodium- and chloride-dependent glycine transporter. .; FUNCTION: [Isoform GlyT-1C]: Sodium- and chloride-dependent glycine transporter. .
Accessions	ENST00000475075.6 ENST00000528803.1 ENST00000372306.7 ENST00000673836.1 [P48067-2] ENST00000372307.7 ENST00000372310.8 [P48067-2] ENST00000360584.6 [P48067-1] B7Z589 ENST00000466926.1 P48067 E9PLM5 ENST00000357730.6 [P48067-3] B7Z3A9 E9PJ65 J3KPA5

SLC6A9 report