Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell of proximal tubule | 9 studies | 44% ± 14% | |
kidney loop of Henle epithelial cell | 7 studies | 25% ± 8% | |
enterocyte | 5 studies | 26% ± 3% | |
kidney distal convoluted tubule epithelial cell | 3 studies | 30% ± 12% | |
GABAergic neuron | 3 studies | 39% ± 26% | |
glutamatergic neuron | 3 studies | 43% ± 26% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 100% | 6809.28 | 89 / 89 | 73% | 2.69 | 661 / 901 |
pancreas | 100% | 2479.58 | 328 / 328 | 18% | 0.36 | 32 / 178 |
liver | 98% | 229.64 | 222 / 226 | 1% | 0.03 | 4 / 406 |
brain | 94% | 52.32 | 2491 / 2642 | 0% | 0.00 | 1 / 705 |
prostate | 93% | 42.25 | 229 / 245 | 0% | 0.00 | 1 / 502 |
stomach | 89% | 38.18 | 321 / 359 | 2% | 0.03 | 6 / 286 |
uterus | 88% | 27.26 | 150 / 170 | 1% | 0.02 | 5 / 459 |
intestine | 86% | 1165.91 | 834 / 966 | 2% | 0.05 | 12 / 527 |
blood vessel | 83% | 25.58 | 1104 / 1335 | 0% | 0 | 0 / 0 |
spleen | 81% | 20.26 | 196 / 241 | 0% | 0 | 0 / 0 |
breast | 78% | 23.17 | 360 / 459 | 1% | 0.01 | 7 / 1118 |
ovary | 76% | 22.08 | 137 / 180 | 1% | 0.01 | 3 / 430 |
lung | 76% | 19.84 | 437 / 578 | 1% | 0.01 | 7 / 1155 |
thymus | 76% | 16.13 | 496 / 653 | 0% | 0 | 0 / 605 |
adipose | 73% | 21.59 | 876 / 1204 | 0% | 0 | 0 / 0 |
muscle | 65% | 16.55 | 523 / 803 | 0% | 0 | 0 / 0 |
skin | 64% | 19.18 | 1156 / 1809 | 0% | 0 | 0 / 472 |
bladder | 62% | 16.33 | 13 / 21 | 1% | 0.01 | 5 / 504 |
esophagus | 46% | 10.47 | 670 / 1445 | 3% | 0.05 | 6 / 183 |
peripheral blood | 45% | 8.64 | 418 / 929 | 0% | 0 | 0 / 0 |
heart | 39% | 6.77 | 339 / 861 | 0% | 0 | 0 / 0 |
adrenal gland | 33% | 5.13 | 84 / 258 | 0% | 0 | 0 / 230 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_1990822 | Biological process | basic amino acid transmembrane transport |
GO_0015813 | Biological process | L-glutamate transmembrane transport |
GO_0005975 | Biological process | carbohydrate metabolic process |
GO_0015810 | Biological process | aspartate transmembrane transport |
GO_0015802 | Biological process | basic amino acid transport |
GO_0015811 | Biological process | L-cystine transport |
GO_0010467 | Biological process | gene expression |
GO_0006865 | Biological process | amino acid transport |
GO_0031526 | Cellular component | brush border membrane |
GO_0016324 | Cellular component | apical plasma membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005774 | Cellular component | vacuolar membrane |
GO_0015171 | Molecular function | amino acid transmembrane transporter activity |
GO_0015174 | Molecular function | basic amino acid transmembrane transporter activity |
GO_0044877 | Molecular function | protein-containing complex binding |
GO_0015184 | Molecular function | L-cystine transmembrane transporter activity |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0005515 | Molecular function | protein binding |
Gene name | SLC3A1 |
Protein name | Amino acid transporter heavy chain SLC3A1 (D2h) (Neutral and basic amino acid transport protein) (NBAT) (Solute carrier family 3 member 1) (b(0,+)-type amino acid transporter-related heavy chain) (rBAT) Solute carrier family 3 (Cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1, isoform CRA_a (Solute carrier family 3 member 1 isoform 1) Solute carrier family 3 member 1 Solute carrier family 3 member 1 isoform 2 |
Synonyms | hCG_16811 NBAT |
Description | FUNCTION: Acts as a chaperone that facilitates biogenesis and trafficking of functional transporter heteromers to the plasma membrane (By similarity). Associates with SLC7A9 to form a functional transporter complex that mediates the electrogenic exchange between cationic amino acids and neutral amino acids, with a stoichiometry of 1:1. SLC7A9-SLC3A1 transporter has system b(0,+)-like activity with high affinity for extracellular cationic amino acids and L-cystine and lower affinity for intracellular neutral amino acids. Substrate exchange is driven by high concentration of intracellular neutral amino acids and the intracellular reduction of L-cystine to L-cysteine. SLC7A9-SLC3A1 acts as a major transporter for reabsorption of L-cystine and dibasic amino acids across the brush border membrane in early proximal tubules . Associates with SLC7A13 to form a functional complex that transports anionic and neutral amino acids via exchange or facilitated diffusion. SLC7A13-SLC3A1 may act as a major transporter for L-cystine in late proximal tubules, ensuring its reabsorption from the luminal fluid in exchange for cytosolic L-glutamate or L-aspartate (By similarity). . |
Accessions | ENST00000409229.7 [Q07837-6] ENST00000427285.1 C9JBK3 ENST00000409294.5 A0A0S2Z4D3 ENST00000409741.5 [Q07837-5] ENST00000410056.7 [Q07837-3] ENST00000611973.4 Q07837 A0A087X0R9 ENST00000260649.11 [Q07837-1] A0A0S2Z4E1 B8ZZK1 ENST00000409380.5 [Q07837-2] B8ZZP2 ENST00000409387.5 ENST00000409740.3 [Q07837-4] |