Name | Number of supported studies | Average coverage | |
---|---|---|---|
hepatocyte | 5 studies | 60% ± 23% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
liver | 3 studies | 26% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 21724.31 | 226 / 226 | 93% | 161.75 | 378 / 406 |
pancreas | 96% | 689.87 | 316 / 328 | 71% | 17.09 | 126 / 178 |
kidney | 96% | 400.84 | 85 / 89 | 41% | 3.41 | 365 / 901 |
intestine | 56% | 236.55 | 538 / 966 | 50% | 3.37 | 262 / 527 |
bladder | 52% | 223.67 | 11 / 21 | 52% | 10.70 | 260 / 504 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.38 | 1 / 1 |
muscle | 98% | 1057.64 | 790 / 803 | 0% | 0 | 0 / 0 |
uterus | 65% | 166.10 | 110 / 170 | 34% | 2.22 | 154 / 459 |
skin | 88% | 885.43 | 1590 / 1809 | 3% | 0.16 | 14 / 472 |
prostate | 50% | 136.93 | 122 / 245 | 40% | 1.88 | 200 / 502 |
esophagus | 41% | 73.67 | 596 / 1445 | 46% | 3.15 | 84 / 183 |
thymus | 52% | 49.33 | 340 / 653 | 30% | 1.30 | 183 / 605 |
lung | 33% | 29.79 | 188 / 578 | 42% | 2.98 | 485 / 1155 |
adrenal gland | 59% | 83.09 | 153 / 258 | 4% | 0.23 | 9 / 230 |
breast | 26% | 28.36 | 121 / 459 | 31% | 0.81 | 342 / 1118 |
stomach | 8% | 7.73 | 28 / 359 | 40% | 2.62 | 113 / 286 |
blood vessel | 41% | 124.06 | 545 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 36% | 1.26 | 16 / 45 |
ovary | 6% | 5.37 | 11 / 180 | 27% | 0.73 | 115 / 430 |
spleen | 31% | 80.16 | 75 / 241 | 0% | 0 | 0 / 0 |
adipose | 29% | 30.82 | 347 / 1204 | 0% | 0 | 0 / 0 |
heart | 17% | 16.02 | 148 / 861 | 0% | 0 | 0 / 0 |
brain | 1% | 0.61 | 17 / 2642 | 8% | 0.54 | 55 / 705 |
peripheral blood | 1% | 1.92 | 10 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1903826 | Biological process | L-arginine transmembrane transport |
GO_0006865 | Biological process | amino acid transport |
GO_0015804 | Biological process | neutral amino acid transport |
GO_0035725 | Biological process | sodium ion transmembrane transport |
GO_1904273 | Biological process | L-alanine import across plasma membrane |
GO_0003333 | Biological process | amino acid transmembrane transport |
GO_0005886 | Cellular component | plasma membrane |
GO_0031528 | Cellular component | microvillus membrane |
GO_0061459 | Molecular function | L-arginine transmembrane transporter activity |
GO_0005283 | Molecular function | amino acid:sodium symporter activity |
GO_0015171 | Molecular function | amino acid transmembrane transporter activity |
GO_0015655 | Molecular function | alanine:sodium symporter activity |
GO_0015179 | Molecular function | L-amino acid transmembrane transporter activity |
GO_0005515 | Molecular function | protein binding |
GO_0005295 | Molecular function | neutral L-amino acid:sodium symporter activity |
Gene name | SLC38A4 |
Protein name | Sodium-coupled neutral amino acid transporter 4 (Amino acid transporter A3) (Na(+)-coupled neutral amino acid transporter 4) (Solute carrier family 38 member 4) (System A amino acid transporter 3) (System N amino acid transporter 3) Solute carrier family 38 member 4 |
Synonyms | NAT3 ATA3 SNAT4 |
Description | FUNCTION: Symporter that cotransports neutral amino acids and sodium ions from the extraccellular to the intracellular side of the cell membrane . The transport is electrogenic, pH dependent and partially tolerates substitution of Na(+) by Li(+) . Preferentially transports smaller amino acids, such as glycine, L-alanine, L-serine, L-asparagine and L-threonine, followed by L-cysteine, L-histidine, L-proline and L-glutamine and L-methionine . . |
Accessions | Q969I6 ENST00000547477.5 H0YHZ8 ENST00000266579.9 F8VRD9 ENST00000447411.5 ENST00000550670.1 ENST00000546940.1 F8VQY9 |