Name | Number of supported studies | Average coverage | |
---|---|---|---|
plasma cell | 12 studies | 31% ± 11% | |
classical monocyte | 8 studies | 25% ± 11% | |
macrophage | 8 studies | 23% ± 8% | |
endothelial cell | 7 studies | 21% ± 4% | |
ciliated cell | 6 studies | 22% ± 7% | |
epithelial cell | 6 studies | 32% ± 13% | |
microglial cell | 6 studies | 23% ± 7% | |
plasmablast | 4 studies | 44% ± 20% | |
non-classical monocyte | 4 studies | 27% ± 10% | |
astrocyte | 4 studies | 22% ± 3% | |
goblet cell | 4 studies | 23% ± 2% | |
plasmacytoid dendritic cell | 4 studies | 20% ± 3% | |
myeloid cell | 3 studies | 21% ± 4% | |
fibroblast | 3 studies | 27% ± 6% | |
type I pneumocyte | 3 studies | 18% ± 1% | |
GABAergic neuron | 3 studies | 29% ± 9% | |
glutamatergic neuron | 3 studies | 33% ± 13% | |
dendritic cell | 3 studies | 27% ± 10% | |
enteroendocrine cell | 3 studies | 27% ± 7% | |
alveolar macrophage | 3 studies | 19% ± 5% | |
monocyte | 3 studies | 19% ± 1% | |
basal cell | 3 studies | 26% ± 6% | |
transit amplifying cell | 3 studies | 25% ± 10% | |
oligodendrocyte | 3 studies | 17% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 6207.48 | 1445 / 1445 | 100% | 46.76 | 183 / 183 |
liver | 100% | 10474.63 | 226 / 226 | 100% | 87.77 | 406 / 406 |
pancreas | 100% | 12211.94 | 328 / 328 | 100% | 73.79 | 178 / 178 |
thymus | 100% | 11006.12 | 653 / 653 | 100% | 93.30 | 605 / 605 |
uterus | 100% | 6984.35 | 170 / 170 | 100% | 59.12 | 458 / 459 |
intestine | 100% | 6635.09 | 966 / 966 | 100% | 55.90 | 525 / 527 |
prostate | 100% | 8541.20 | 245 / 245 | 100% | 87.04 | 500 / 502 |
adrenal gland | 100% | 8512.85 | 258 / 258 | 100% | 72.66 | 229 / 230 |
skin | 100% | 6408.83 | 1808 / 1809 | 100% | 78.01 | 470 / 472 |
kidney | 100% | 7342.36 | 89 / 89 | 99% | 54.55 | 895 / 901 |
stomach | 100% | 6951.14 | 359 / 359 | 99% | 52.02 | 284 / 286 |
lung | 100% | 7557.38 | 577 / 578 | 99% | 65.84 | 1148 / 1155 |
breast | 100% | 7513.09 | 459 / 459 | 99% | 57.89 | 1108 / 1118 |
bladder | 100% | 7871.38 | 21 / 21 | 99% | 65.54 | 498 / 504 |
ovary | 100% | 8321.98 | 180 / 180 | 98% | 36.35 | 422 / 430 |
brain | 97% | 2741.36 | 2553 / 2642 | 99% | 43.30 | 701 / 705 |
adipose | 100% | 8127.13 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 85.54 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 60.82 | 29 / 29 |
spleen | 100% | 10484.05 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 44.75 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 36.71 | 1 / 1 |
blood vessel | 100% | 8091.00 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 4760.44 | 854 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 5454.87 | 910 / 929 | 0% | 0 | 0 / 0 |
muscle | 84% | 2021.13 | 678 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0060348 | Biological process | bone development |
GO_0003333 | Biological process | amino acid transmembrane transport |
GO_1902475 | Biological process | L-alpha-amino acid transmembrane transport |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0016020 | Cellular component | membrane |
GO_0015179 | Molecular function | L-amino acid transmembrane transporter activity |
Gene name | SLC38A10 |
Protein name | Solute carrier family 38 member 10 SLC38A10 protein Solute carrier family 38 member 10 (Amino acid transporter SLC38A10) |
Synonyms | PP1744 |
Description | FUNCTION: Facilitates bidirectional transport of amino acids. May act as a glutamate sensor that regulates glutamate-glutamine cycle and mTOR signaling in the brain. The transport mechanism remains to be elucidated. . |
Accessions | ENST00000576151.1 F5H3T4 ENST00000539748.1 ENST00000540966.5 ENST00000374759.8 [Q9HBR0-1] H0YF92 Q8WW39 I3L0Q8 Q9HBR0 H0YGS1 ENST00000288439.9 [Q9HBR0-2] ENST00000543204.1 |