SLC28A3 | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of SLC28A3 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
pancreas	100%	1177.32	328 / 328	87%	13.41	155 / 178
esophagus	39%	357.36	564 / 1445	81%	11.02	148 / 183
lung	49%	215.62	285 / 578	57%	4.39	655 / 1155
breast	60%	1752.47	275 / 459	45%	6.70	504 / 1118
intestine	28%	134.13	275 / 966	61%	5.74	322 / 527
tonsil	0%	0	0 / 0	89%	12.69	40 / 45
skin	73%	1650.06	1327 / 1809	15%	1.11	70 / 472
ovary	1%	3.19	2 / 180	74%	6.40	319 / 430
uterus	8%	42.50	14 / 170	65%	6.93	298 / 459
stomach	18%	86.09	66 / 359	54%	5.68	155 / 286
bladder	0%	0	0 / 21	44%	4.58	223 / 504
adipose	40%	587.32	482 / 1204	0%	0	0 / 0
thymus	4%	8.20	25 / 653	22%	0.96	134 / 605
peripheral blood	16%	46.96	144 / 929	0%	0	0 / 0
liver	4%	8.58	10 / 226	9%	1.43	37 / 406
spleen	12%	32.81	29 / 241	0%	0	0 / 0
heart	7%	34.49	61 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	7%	0.19	2 / 29
prostate	3%	18.82	8 / 245	2%	0.06	8 / 502
blood vessel	3%	13.36	43 / 1335	0%	0	0 / 0
kidney	1%	2.55	1 / 89	2%	0.08	15 / 901
brain	2%	4.13	44 / 2642	1%	0.04	6 / 705
adrenal gland	0%	0.74	1 / 258	0%	0.01	1 / 230
muscle	0%	0.68	2 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0006805	Biological process	xenobiotic metabolic process
GO_0006855	Biological process	xenobiotic transmembrane transport
GO_1904823	Biological process	purine nucleobase transmembrane transport
GO_0015855	Biological process	pyrimidine nucleobase transport
GO_0072531	Biological process	pyrimidine-containing compound transmembrane transport
GO_0015862	Biological process	uridine transmembrane transport
GO_0015864	Biological process	pyrimidine nucleoside transport
GO_0015860	Biological process	purine nucleoside transmembrane transport
GO_1901642	Biological process	nucleoside transmembrane transport
GO_0035725	Biological process	sodium ion transmembrane transport
GO_0031526	Cellular component	brush border membrane
GO_0005886	Cellular component	plasma membrane
GO_0005789	Cellular component	endoplasmic reticulum membrane
GO_0005415	Molecular function	nucleoside:sodium symporter activity
GO_0005345	Molecular function	purine nucleobase transmembrane transporter activity
GO_0015390	Molecular function	purine-specific nucleoside:sodium symporter activity
GO_0015389	Molecular function	pyrimidine- and adenosine-specific:sodium symporter activity
GO_0015213	Molecular function	uridine transmembrane transporter activity
GO_0005515	Molecular function	protein binding

Gene name	SLC28A3
Protein name	Solute carrier family 28 member 3 (Concentrative Na(+)-nucleoside cotransporter 3) (CNT 3) (hCNT3)
Synonyms	CNT3
Description	FUNCTION: Sodium-dependent, pyrimidine- and purine-selective . Involved in the homeostasis of endogenous nucleosides . Exhibits the transport characteristics of the nucleoside transport system cib or N3 subtype (N3/cib) (with marked transport of both thymidine and inosine) . Employs a 2:1 sodium/nucleoside ratio . Transports uridine . Also able to transport gemcitabine, 3'-azido-3'-deoxythymidine (AZT), ribavirin and 3-deazauridine . .
Accessions	ENST00000376238.5 [Q9HAS3-1] Q9HAS3

SLC28A3 report