SLC26A5 report

I. Expression across cell types

Insufficient scRNA-seq data for expression of SLC26A5 at single-cell level.

II. Expression across tissues

sc-RNAseq data

Insufficient scRNA-seq data for expression of SLC26A5 at tissue level.

III. Associated gene sets

GO_0007605Biological processsensory perception of sound
GO_0010996Biological processresponse to auditory stimulus
GO_0042391Biological processregulation of membrane potential
GO_0002931Biological processresponse to ischemia
GO_0035864Biological processresponse to potassium ion
GO_0006821Biological processchloride transport
GO_0097066Biological processresponse to thyroid hormone
GO_0019532Biological processoxalate transport
GO_2000147Biological processpositive regulation of cell motility
GO_0015755Biological processfructose transmembrane transport
GO_1902074Biological processresponse to salt
GO_1902476Biological processchloride transmembrane transport
GO_0090102Biological processcochlea development
GO_1902358Biological processsulfate transmembrane transport
GO_0034766Biological processnegative regulation of monoatomic ion transmembrane transport
GO_0008360Biological processregulation of cell shape
GO_0045793Biological processpositive regulation of cell size
GO_0009410Biological processresponse to xenobiotic stimulus
GO_0015701Biological processbicarbonate transport
GO_0009751Biological processresponse to salicylic acid
GO_0005886Cellular componentplasma membrane
GO_0120249Cellular componentlateral wall of outer hair cell
GO_0016328Cellular componentlateral plasma membrane
GO_0016323Cellular componentbasolateral plasma membrane
GO_0042803Molecular functionprotein homodimerization activity
GO_0019531Molecular functionoxalate transmembrane transporter activity
GO_0015116Molecular functionsulfate transmembrane transporter activity
GO_0030507Molecular functionspectrin binding
GO_0015106Molecular functionbicarbonate transmembrane transporter activity
GO_0008271Molecular functionsecondary active sulfate transmembrane transporter activity
GO_0015108Molecular functionchloride transmembrane transporter activity
GO_0140900Molecular functionchloride:bicarbonate antiporter activity

IV. Literature review

[source]
Gene nameSLC26A5
Protein nameSolute carrier family 26 member 5
SLC26A5 protein (Solute carrier family 26 member 5)
Prestin (Solute carrier family 26 member 5)
SynonymsPRES
DescriptionFUNCTION: Voltage-sensitive motor protein that drives outer hair cell (OHC) electromotility (eM) and participates in sound amplification in the hearing organ (By similarity). Converts changes in the transmembrane electric potential into mechanical displacements resulting in the coupling of its expansion to movement of a charged voltage sensor across the lipid membrane (By similarity). The nature of the voltage sensor is not completely clear, and two models compete. In the first model, acts as an incomplete transporter where intracellular chloride anion acts as extrinsic voltage sensor that drives conformational change in the protein which is sufficient to produce a length change in the plane of the membrane and hence in the length of the OHC (By similarity). The second model in which multiple charged amino acid residues are distributed at the intracellular and extracellular membrane interfaces that form an intrinsic voltage sensor, whose movement produces the non-linear capacitance (NLC) . However, the effective voltage sensor may be the result of a hybrid voltage sensor, assembled from intrinsic charge (charged residues) and extrinsic charge (bound anion) (By similarity). Notably, binding of anions to the anion-binding pocket partially neutralizes the intrinsic positive charge rather than to form an electrically negative sensor, therefore remaining charge may serve as voltage sensor that, after depolarization, moves from down (expanded state) to up (contracted) conformation, which is accompanied by an eccentric contraction of the intermembrane cross-sectional area of the protein as well as a major increase in the hydrophobic thickness of the protein having as consequences the plasma membrane thickening and the cell contraction after membrane depolarization . The anion-binding pocket transits from the inward-open (Down) state, where it is exposed toward the intracellular solvent in the absence of anion, to the occluded (Up) state upon anion binding . Salicylate competes for the anion-binding site and inhibits the voltage-sensor movement, and therefore inhibits the charge transfer and electromotility by displacing Cl(-) from the anion-binding site and by preventing the structural transitions to the contracted state . In addition, can act as a weak Cl(-)/HCO3(-) antiporter across the cell membrane and so regulate the intracellular pH of the outer hair cells (OHCs), while firstly found as being unable to mediate electrogenic anion transport (By similarity). Moreover, supports a role in cardiac mechanical amplification serving as an elastic element to enhance the actomyosin- based sarcomere contraction system (By similarity). .

FUNCTION: Voltage-sensitive motor protein that drives outer hair cell (OHC) electromotility (eM) and participates in sound amplification in the hearing organ. Converts changes in the transmembrane electric potential into mechanical displacements resulting in the coupling of its expansion to movement of a charged voltage sensor across the lipid membrane. The nature of the voltage sensor is not completely clear, and two models compete. In the first model, acts as an incomplete transporter where intracellular chloride anion acts as extrinsic voltage sensor that drives conformational change in the protein which is sufficient to produce a length change in the plane of the membrane and hence in the length of the OHC. The second model in which multiple charged amino acid residues are distributed at the intracellular and extracellular membrane interfaces that form an intrinsic voltage sensor, whose movement produces the non-linear capacitance (NLC). However, the effective voltage sensor may be the result of a hybrid voltage sensor, assembled from intrinsic charge (charged residues) and extrinsic charge (bound anion). Notably, binding of anions to the anion-binding pocket partially neutralizes the intrinsic positive charge rather than to form an electrically negative sensor, therefore remaining charge may serve as voltage sensor that, after depolarization, moves from down (expanded state) to up (contracted) conformation, which is accompanied by an eccentric contraction of the intermembrane cross-sectional area of the protein as well as a major increase in the hydrophobic thickness of the protein having as consequences the plasma membrane thickening and the cell contraction after membrane depolarization. The anion-binding pocket transits from the inward-open (Down) state, where it is exposed toward the intracellular solvent in the absence of anion, to the occluded (Up) state upon anion binding. Salicylate competes for the anion-binding site and inhibits the voltage-sensor movement, and therefore inhibits the charge transfer and electromotility by displacing Cl(-) from the anion-binding site and by preventing the structural transitions to the contracted state. In addition, can act as a weak Cl(-)/HCO3(-) antiporter across the cell membrane and so regulate the intracellular pH of the outer hair cells (OHCs), while firstly found as being unable to mediate electrogenic anion transport. Moreover, supports a role in cardiac mechanical amplification serving as an elastic element to enhance the actomyosin- based sarcomere contraction system. .

FUNCTION: Voltage-sensitive motor protein that drives outer hair cell (OHC) electromotility (eM) and participates in sound amplification in the hearing organ. Converts changes in the transmembrane electric potential into mechanical displacements resulting in the coupling of its expansion to movement of a charged voltage sensor across the lipid membrane. The nature of the voltage sensor is not completely clear, and two models compete. In the first model, acts as an incomplete transporter where intracellular chloride anion acts as extrinsic voltage sensor that drives conformational change in the protein which is sufficient to produce a length change in the plane of the membrane and hence in the length of the OHC. The second model in which multiple charged amino acid residues are distributed at the intracellular and extracellular membrane interfaces that form an intrinsic voltage sensor, whose movement produces the non-linear capacitance (NLC). However, the effective voltage sensor may be the result of a hybrid voltage sensor, assembled from intrinsic charge (charged residues) and extrinsic charge (bound anion). Notably, binding of anions to the anion-binding pocket partially neutralizes the intrinsic positive charge rather than to form an electrically negative sensor, therefore remaining charge may serve as voltage sensor that, after depolarization, moves from down (expanded state) to up (contracted) conformation, which is accompanied by an eccentric contraction of the intermembrane cross-sectional area of the protein as well as a major increase in the hydrophobic thickness of the protein having as consequences the plasma membrane thickening and the cell contraction after membrane depolarization. The anion-binding pocket transits from the inward-open (Down) state, where it is exposed toward the intracellular solvent in the absence of anion, to the occluded (Up) state upon anion binding. Salicylate competes for the anion-binding site and inhibits the voltage-sensor movement, and therefore inhibits the charge transfer and electromotility by displacing Cl(-) from the anion-binding site and by preventing the structural transitions to the contracted state. In addition, can act as a weak Cl(-)/HCO3(-) antiporter across the cell membrane and so regulate the intracellular pH of the outer hair cells (OHCs), while firstly found as being unable to mediate electrogenic anion transport. Moreover, supports a role in cardiac mechanical amplification serving as an elastic element to enhance the actomyosin- based sarcomere contraction system. .

AccessionsQ496J1
Q496J0
ENST00000393730.5 [P58743-5]
P58743
ENST00000306312.8 [P58743-1]
ENST00000393729.5
ENST00000445809.5
ENST00000393723.2 [P58743-6]
ENST00000393735.6 [P58743-3]
ENST00000423416.5
ENST00000393727.5
F8WDL4
E9PCM2
F8WD50
ENST00000432958.6 [P58743-5]
ENST00000454864.5
ENST00000356767.8 [P58743-4]
Q496J3
ENST00000339444.10 [P58743-2]
Q7Z7F4
ENST00000456463.5