SLC22A16 | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of SLC22A16 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
uterus	84%	64.79	142 / 170	15%	0.78	70 / 459
spleen	94%	51.12	227 / 241	0%	0	0 / 0
lung	89%	44.46	515 / 578	5%	0.18	57 / 1155
peripheral blood	82%	133.36	758 / 929	0%	0	0 / 0
adipose	74%	24.37	890 / 1204	0%	0	0 / 0
breast	60%	13.18	277 / 459	5%	0.13	51 / 1118
prostate	42%	8.96	103 / 245	11%	0.25	54 / 502
adrenal gland	40%	8.08	102 / 258	0%	0.01	1 / 230
blood vessel	40%	11.11	528 / 1335	0%	0	0 / 0
ovary	31%	4.67	55 / 180	8%	0.36	36 / 430
kidney	35%	5.88	31 / 89	4%	0.16	33 / 901
skin	35%	7.40	626 / 1809	1%	0.07	6 / 472
bladder	33%	8.71	7 / 21	2%	0.03	9 / 504
intestine	27%	4.52	264 / 966	2%	0.03	8 / 527
thymus	22%	3.32	142 / 653	6%	0.14	39 / 605
stomach	26%	4.69	95 / 359	1%	0.05	4 / 286
esophagus	26%	4.57	378 / 1445	2%	0.03	3 / 183
brain	23%	3.04	617 / 2642	0%	0.00	2 / 705
liver	20%	3.09	46 / 226	0%	0.01	2 / 406
pancreas	16%	2.16	52 / 328	3%	0.12	6 / 178
heart	18%	2.53	155 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	11%	0.29	5 / 45
muscle	8%	1.27	66 / 803	0%	0	0 / 0
lymph node	0%	0	0 / 0	3%	0.04	1 / 29
eye	0%	0	0 / 0	1%	0.01	1 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0006811	Biological process	monoatomic ion transport
GO_1903711	Biological process	spermidine transmembrane transport
GO_1902603	Biological process	carnitine transmembrane transport
GO_0007338	Biological process	single fertilization
GO_0015837	Biological process	amine transport
GO_0007283	Biological process	spermatogenesis
GO_0015695	Biological process	organic cation transport
GO_0030317	Biological process	flagellated sperm motility
GO_0030154	Biological process	cell differentiation
GO_0046717	Biological process	acid secretion
GO_0015879	Biological process	carnitine transport
GO_0005829	Cellular component	cytosol
GO_0005886	Cellular component	plasma membrane
GO_0016020	Cellular component	membrane
GO_0015606	Molecular function	spermidine transmembrane transporter activity
GO_0015226	Molecular function	carnitine transmembrane transporter activity
GO_0005275	Molecular function	amine transmembrane transporter activity
GO_0015101	Molecular function	organic cation transmembrane transporter activity

Gene name	SLC22A16
Protein name	Solute carrier family 22 member 16 Solute carrier family 22 member 16 (Carnitine transporter 2) (CT2) (Fly-like putative transporter 2) (FLIPT2) (Flipt 2) (Organic cation transporter OKB1) (Organic cation/carnitine transporter 6) SLC22A16 protein
Synonyms	OCT6
Description	FUNCTION: Facilitative organic cation transporter that mediates the transport of carnitine as well as the polyamine spermidine . Mediates the partially Na(+)-dependent bidirectional transport of carnitine . May mediate L-carnitine secretion from testis epididymal epithelium into the lumen which is involved in the maturation of spermatozoa . .
Accessions	C9JTF8 ENST00000368919.8 [Q86VW1-1] ENST00000424139.1 X6RE50 ENST00000451557.5 Q86VW1 ENST00000437378.5 Q96ER0 ENST00000434949.5 ENST00000330550.8 [Q86VW1-2] C9JGT0 C9JU94

SLC22A16 report