Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 16 studies | 73% ± 15% | |
oligodendrocyte precursor cell | 15 studies | 51% ± 18% | |
glutamatergic neuron | 10 studies | 38% ± 22% | |
GABAergic neuron | 9 studies | 50% ± 19% | |
astrocyte | 7 studies | 31% ± 10% | |
interneuron | 6 studies | 50% ± 13% | |
Mueller cell | 6 studies | 34% ± 18% | |
neuron | 5 studies | 35% ± 14% | |
endothelial cell | 4 studies | 37% ± 16% | |
granule cell | 4 studies | 30% ± 6% | |
GABAergic interneuron | 3 studies | 31% ± 4% | |
microglial cell | 3 studies | 32% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 16 studies | 44% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 6609.66 | 2642 / 2642 | 100% | 132.75 | 705 / 705 |
thymus | 80% | 458.66 | 523 / 653 | 97% | 8.66 | 584 / 605 |
adrenal gland | 91% | 689.79 | 236 / 258 | 83% | 7.87 | 190 / 230 |
prostate | 53% | 278.00 | 130 / 245 | 98% | 8.97 | 492 / 502 |
pancreas | 58% | 323.46 | 191 / 328 | 78% | 5.30 | 139 / 178 |
ovary | 37% | 196.93 | 67 / 180 | 98% | 21.62 | 423 / 430 |
lung | 59% | 364.99 | 340 / 578 | 65% | 7.28 | 754 / 1155 |
stomach | 77% | 460.65 | 275 / 359 | 37% | 3.18 | 107 / 286 |
kidney | 36% | 174.10 | 32 / 89 | 76% | 5.83 | 684 / 901 |
lymph node | 0% | 0 | 0 / 0 | 90% | 11.53 | 26 / 29 |
spleen | 81% | 452.05 | 195 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 79% | 504.05 | 1050 / 1335 | 0% | 0 | 0 / 0 |
esophagus | 35% | 190.75 | 512 / 1445 | 39% | 3.95 | 72 / 183 |
intestine | 43% | 231.66 | 411 / 966 | 30% | 2.70 | 158 / 527 |
skin | 5% | 24.76 | 97 / 1809 | 63% | 7.46 | 297 / 472 |
uterus | 29% | 168.44 | 50 / 170 | 32% | 3.43 | 148 / 459 |
liver | 32% | 158.06 | 72 / 226 | 21% | 1.14 | 86 / 406 |
breast | 17% | 82.15 | 79 / 459 | 28% | 2.55 | 312 / 1118 |
bladder | 10% | 38.86 | 2 / 21 | 33% | 2.64 | 166 / 504 |
peripheral blood | 26% | 767.96 | 242 / 929 | 0% | 0 | 0 / 0 |
heart | 23% | 112.02 | 197 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 19% | 1.25 | 15 / 80 |
tonsil | 0% | 0 | 0 / 0 | 16% | 1.33 | 7 / 45 |
adipose | 13% | 64.99 | 157 / 1204 | 0% | 0 | 0 / 0 |
muscle | 2% | 7.08 | 14 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007020 | Biological process | microtubule nucleation |
GO_0031122 | Biological process | cytoplasmic microtubule organization |
GO_0031116 | Biological process | positive regulation of microtubule polymerization |
GO_0035371 | Cellular component | microtubule plus-end |
GO_0005737 | Cellular component | cytoplasm |
GO_0005515 | Molecular function | protein binding |
Gene name | SLAIN1 |
Protein name | SLAIN1 protein SLAIN motif family member 1 (cDNA FLJ52498) SLAIN motif family member 1 SLAIN motif-containing protein 1 |
Synonyms | C13orf32 |
Description | FUNCTION: Microtubule plus-end tracking protein that might be involved in the regulation of cytoplasmic microtubule dynamics, microtubule organization and microtubule elongation. . |
Accessions | Q5T6P2 ENST00000418532.6 ENST00000481614.1 ENST00000314070.9 [Q8ND83-3] A0A994J5K0 Q5T6P1 ENST00000474663.5 C9JUW9 A0A0C4DFN6 C9JAC5 C9JD09 A0A0A0MSS3 ENST00000442759.5 ENST00000422114.5 C9JP03 ENST00000351546.7 ENST00000705543.1 ENST00000496045.5 ENST00000358679.3 [Q8ND83-2] Q8ND83 X6RGK9 ENST00000267219.12 ENST00000466548.5 [Q8ND83-1] ENST00000441784.5 ENST00000488699.5 [Q8ND83-4] ENST00000446759.6 ENST00000462234.5 Q5T6P5 Q7L0J2 X6RDJ2 B7Z326 ENST00000377236.2 |