Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| endothelial cell | 4 studies | 18% ± 3% | |
| epithelial cell | 4 studies | 18% ± 3% | |
| ciliated cell | 3 studies | 20% ± 3% | |
| GABAergic neuron | 3 studies | 26% ± 6% | |
| glutamatergic neuron | 3 studies | 31% ± 6% | |
| oligodendrocyte | 3 studies | 24% ± 2% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 4 studies | 24% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| breast | 100% | 864.05 | 459 / 459 | 100% | 16.17 | 1118 / 1118 |
| esophagus | 100% | 742.29 | 1445 / 1445 | 100% | 9.50 | 183 / 183 |
| intestine | 100% | 778.10 | 966 / 966 | 100% | 12.09 | 527 / 527 |
| ovary | 100% | 853.51 | 180 / 180 | 100% | 12.09 | 430 / 430 |
| skin | 100% | 1188.66 | 1809 / 1809 | 100% | 15.79 | 472 / 472 |
| stomach | 100% | 627.55 | 359 / 359 | 100% | 11.78 | 286 / 286 |
| bladder | 100% | 876.62 | 21 / 21 | 100% | 12.06 | 503 / 504 |
| prostate | 100% | 744.74 | 245 / 245 | 100% | 9.77 | 501 / 502 |
| thymus | 100% | 964.14 | 653 / 653 | 100% | 11.88 | 603 / 605 |
| lung | 100% | 748.27 | 576 / 578 | 100% | 9.76 | 1155 / 1155 |
| uterus | 100% | 919.20 | 170 / 170 | 99% | 11.18 | 456 / 459 |
| pancreas | 100% | 513.03 | 327 / 328 | 99% | 8.07 | 177 / 178 |
| kidney | 100% | 627.93 | 89 / 89 | 99% | 8.05 | 893 / 901 |
| brain | 98% | 421.31 | 2592 / 2642 | 100% | 6.33 | 704 / 705 |
| adrenal gland | 100% | 1015.92 | 258 / 258 | 97% | 7.46 | 224 / 230 |
| liver | 100% | 438.75 | 226 / 226 | 95% | 5.45 | 386 / 406 |
| adipose | 100% | 833.21 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 14.56 | 29 / 29 |
| muscle | 100% | 756.27 | 803 / 803 | 0% | 0 | 0 / 0 |
| spleen | 100% | 876.42 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 10.21 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 7.55 | 1 / 1 |
| blood vessel | 100% | 634.94 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| heart | 99% | 767.30 | 849 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 96% | 6.55 | 77 / 80 |
| peripheral blood | 65% | 472.66 | 601 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_2000233 | Biological process | negative regulation of rRNA processing |
| GO_1904874 | Biological process | positive regulation of telomerase RNA localization to Cajal body |
| GO_0000493 | Biological process | box H/ACA snoRNP assembly |
| GO_0043065 | Biological process | positive regulation of apoptotic process |
| GO_0022618 | Biological process | protein-RNA complex assembly |
| GO_0015030 | Cellular component | Cajal body |
| GO_0005730 | Cellular component | nucleolus |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0005829 | Cellular component | cytosol |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0051082 | Molecular function | unfolded protein binding |
| GO_0005515 | Molecular function | protein binding |
| Gene name | SHQ1 |
| Protein name | SHQ1, H/ACA ribonucleoprotein assembly factor Protein SHQ1 homolog |
| Synonyms | |
| Description | FUNCTION: Required for the quantitative accumulation of H/ACA ribonucleoproteins (RNPs), including telomerase, probably through the stabilization of DKC1, from the time of its synthesis until its association with NOP10, NHP2, and NAF1 at the nascent H/ACA RNA. . |
| Accessions | F8WBC6 ENST00000471526.1 C9J6N3 ENST00000482785.1 F8WDZ9 ENST00000444040.6 Q6PI26 ENST00000463369.5 [Q6PI26-2] ENST00000325599.13 [Q6PI26-1] |
