SH3TC2 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
oligodendrocyte	14 studies	46% ± 18%	Explore
retinal rod cell	3 studies	30% ± 13%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	6 studies	26% ± 14%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
skin	65%	133.42	1168 / 1809	77%	2.71	365 / 472
brain	90%	811.24	2378 / 2642	30%	0.67	209 / 705
intestine	61%	123.85	587 / 966	46%	0.91	243 / 527
bladder	57%	228.52	12 / 21	42%	0.98	213 / 504
esophagus	80%	260.68	1163 / 1445	16%	0.27	30 / 183
heart	89%	423.40	765 / 861	0%	0	0 / 0
breast	76%	211.87	350 / 459	2%	0.03	22 / 1118
adipose	60%	140.04	721 / 1204	0%	0	0 / 0
prostate	56%	96.57	138 / 245	0%	0.00	1 / 502
stomach	18%	29.99	63 / 359	34%	0.71	98 / 286
uterus	38%	58.45	64 / 170	7%	0.14	34 / 459
spleen	39%	60.71	95 / 241	0%	0	0 / 0
eye	0%	0	0 / 0	30%	0.51	24 / 80
lung	25%	37.97	142 / 578	4%	0.07	45 / 1155
thymus	28%	38.73	184 / 653	0%	0.00	1 / 605
kidney	12%	26.62	11 / 89	2%	0.03	16 / 901
pancreas	2%	1.88	5 / 328	12%	0.26	22 / 178
blood vessel	12%	23.96	162 / 1335	0%	0	0 / 0
liver	10%	25.35	23 / 226	1%	0.02	6 / 406
muscle	7%	9.15	57 / 803	0%	0	0 / 0
peripheral blood	4%	5.35	36 / 929	0%	0	0 / 0
ovary	3%	4.19	6 / 180	0%	0.00	1 / 430
adrenal gland	2%	3.19	6 / 258	0%	0.00	1 / 230
tonsil	0%	0	0 / 0	2%	0.06	1 / 45
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1