Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 13 studies | 25% ± 6% | |
endothelial cell of lymphatic vessel | 11 studies | 25% ± 14% | |
platelet | 9 studies | 33% ± 13% | |
epithelial cell | 8 studies | 31% ± 9% | |
goblet cell | 7 studies | 27% ± 11% | |
glutamatergic neuron | 7 studies | 50% ± 24% | |
retinal ganglion cell | 6 studies | 53% ± 26% | |
ciliated cell | 6 studies | 19% ± 4% | |
squamous epithelial cell | 4 studies | 37% ± 17% | |
neuron | 4 studies | 22% ± 6% | |
megakaryocyte | 4 studies | 32% ± 13% | |
GABAergic neuron | 4 studies | 41% ± 18% | |
interneuron | 4 studies | 36% ± 22% | |
granule cell | 3 studies | 25% ± 10% | |
club cell | 3 studies | 20% ± 3% | |
oligodendrocyte precursor cell | 3 studies | 25% ± 6% | |
basal cell | 3 studies | 27% ± 7% | |
astrocyte | 3 studies | 30% ± 9% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 8 studies | 33% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 3423.93 | 245 / 245 | 99% | 59.17 | 496 / 502 |
intestine | 99% | 4017.54 | 959 / 966 | 99% | 81.64 | 520 / 527 |
stomach | 100% | 4202.14 | 359 / 359 | 98% | 74.25 | 279 / 286 |
thymus | 100% | 8488.99 | 653 / 653 | 93% | 159.58 | 564 / 605 |
liver | 99% | 3181.62 | 224 / 226 | 93% | 38.13 | 377 / 406 |
pancreas | 94% | 1443.47 | 307 / 328 | 97% | 52.45 | 173 / 178 |
brain | 99% | 3242.72 | 2627 / 2642 | 87% | 22.38 | 614 / 705 |
bladder | 100% | 2284.00 | 21 / 21 | 81% | 37.99 | 409 / 504 |
kidney | 100% | 2247.24 | 89 / 89 | 78% | 22.00 | 703 / 901 |
lung | 97% | 2201.58 | 560 / 578 | 80% | 36.67 | 920 / 1155 |
esophagus | 100% | 4848.45 | 1438 / 1445 | 72% | 55.11 | 132 / 183 |
breast | 100% | 4961.39 | 459 / 459 | 59% | 13.03 | 663 / 1118 |
uterus | 100% | 2459.96 | 170 / 170 | 57% | 17.89 | 261 / 459 |
adrenal gland | 55% | 536.39 | 141 / 258 | 68% | 30.58 | 157 / 230 |
ovary | 44% | 536.33 | 80 / 180 | 75% | 20.73 | 323 / 430 |
ureter | 0% | 0 | 0 / 0 | 100% | 15.15 | 1 / 1 |
adipose | 100% | 5231.43 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 89% | 1548.61 | 1189 / 1335 | 0% | 0 | 0 / 0 |
skin | 69% | 1756.25 | 1241 / 1809 | 13% | 2.15 | 59 / 472 |
spleen | 72% | 799.15 | 174 / 241 | 0% | 0 | 0 / 0 |
heart | 62% | 661.15 | 536 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 53% | 16.97 | 24 / 45 |
muscle | 37% | 365.55 | 295 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 18% | 204.80 | 171 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 10% | 1.71 | 3 / 29 |
eye | 0% | 0 | 0 / 0 | 3% | 0.57 | 2 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005654 | Cellular component | nucleoplasm |
GO_0031965 | Cellular component | nuclear membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0017124 | Molecular function | SH3 domain binding |
Gene name | SH3BGRL2 |
Protein name | SH3 domain-binding glutamic acid-rich-like protein 2 (Fovea-associated SH3 domain-binding protein) |
Synonyms | FASH3 |
Description | |
Accessions | Q9UJC5 ENST00000369838.6 |