Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 20 studies | 52% ± 24% | |
glutamatergic neuron | 9 studies | 42% ± 26% | |
endothelial cell | 6 studies | 24% ± 8% | |
epithelial cell | 4 studies | 19% ± 1% | |
cardiac muscle cell | 4 studies | 17% ± 1% | |
Mueller cell | 4 studies | 24% ± 1% | |
hepatocyte | 4 studies | 60% ± 16% | |
GABAergic neuron | 4 studies | 52% ± 16% | |
oligodendrocyte | 4 studies | 27% ± 6% | |
microglial cell | 3 studies | 22% ± 6% | |
oligodendrocyte precursor cell | 3 studies | 21% ± 8% | |
ependymal cell | 3 studies | 40% ± 14% | |
interneuron | 3 studies | 37% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 12556.08 | 2641 / 2642 | 100% | 62.26 | 705 / 705 |
liver | 100% | 5911.08 | 226 / 226 | 98% | 13.64 | 399 / 406 |
adrenal gland | 100% | 3443.10 | 258 / 258 | 97% | 6.85 | 222 / 230 |
kidney | 100% | 3438.53 | 89 / 89 | 94% | 5.22 | 850 / 901 |
prostate | 83% | 1165.70 | 204 / 245 | 97% | 6.51 | 488 / 502 |
intestine | 88% | 1352.63 | 849 / 966 | 90% | 4.64 | 476 / 527 |
thymus | 72% | 847.86 | 469 / 653 | 97% | 5.21 | 589 / 605 |
bladder | 71% | 935.14 | 15 / 21 | 96% | 6.16 | 484 / 504 |
uterus | 66% | 784.16 | 113 / 170 | 98% | 8.24 | 450 / 459 |
lung | 71% | 920.51 | 409 / 578 | 93% | 4.72 | 1078 / 1155 |
skin | 72% | 957.64 | 1305 / 1809 | 86% | 4.19 | 408 / 472 |
stomach | 54% | 635.75 | 195 / 359 | 91% | 4.88 | 260 / 286 |
esophagus | 46% | 524.83 | 663 / 1445 | 93% | 4.60 | 170 / 183 |
ovary | 42% | 465.79 | 75 / 180 | 91% | 4.95 | 392 / 430 |
breast | 29% | 343.93 | 135 / 459 | 95% | 11.46 | 1066 / 1118 |
spleen | 100% | 2132.13 | 240 / 241 | 0% | 0 | 0 / 0 |
pancreas | 6% | 66.57 | 19 / 328 | 93% | 4.71 | 166 / 178 |
tonsil | 0% | 0 | 0 / 0 | 98% | 5.61 | 44 / 45 |
lymph node | 0% | 0 | 0 / 0 | 97% | 4.48 | 28 / 29 |
peripheral blood | 63% | 1608.69 | 584 / 929 | 0% | 0 | 0 / 0 |
muscle | 60% | 711.90 | 480 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 50% | 2.22 | 40 / 80 |
blood vessel | 40% | 464.85 | 533 / 1335 | 0% | 0 | 0 / 0 |
heart | 38% | 416.01 | 328 / 861 | 0% | 0 | 0 / 0 |
adipose | 21% | 218.62 | 248 / 1204 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0034220 | Biological process | monoatomic ion transmembrane transport |
GO_0006865 | Biological process | amino acid transport |
GO_0015746 | Biological process | citrate transport |
GO_1990542 | Biological process | mitochondrial transmembrane transport |
GO_0120162 | Biological process | positive regulation of cold-induced thermogenesis |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0015137 | Molecular function | citrate transmembrane transporter activity |
GO_0015075 | Molecular function | monoatomic ion transmembrane transporter activity |
GO_0005515 | Molecular function | protein binding |
Gene name | SFXN5 |
Protein name | Sideroflexin 5 Sideroflexin-5 |
Synonyms | |
Description | FUNCTION: Mitochondrial amino-acid transporter (By similarity). Transports citrate (By similarity). Does not act as a serine transporter: not able to mediate transport of serine into mitochondria (By similarity). In brown adipose tissue, plays a role in the regulation of UCP1-dependent thermogenesis probably by supporting mitochondrial glycerol-3-phosphate utilization (By similarity). . |
Accessions | ENST00000411783.5 B8ZZJ6 ENST00000450185.5 H7C1S9 C9JIV5 ENST00000410065.5 ENST00000442582.1 Q8TD22 ENST00000272433.7 F8WBH6 |