Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 16 studies | 66% ± 18% | |
glutamatergic neuron | 12 studies | 54% ± 20% | |
GABAergic neuron | 8 studies | 44% ± 17% | |
neuron | 7 studies | 42% ± 22% | |
astrocyte | 6 studies | 32% ± 15% | |
interneuron | 6 studies | 46% ± 18% | |
retina horizontal cell | 5 studies | 24% ± 4% | |
granule cell | 4 studies | 58% ± 11% | |
endothelial cell | 3 studies | 48% ± 19% | |
GABAergic interneuron | 3 studies | 42% ± 13% | |
GABAergic amacrine cell | 3 studies | 19% ± 2% | |
amacrine cell | 3 studies | 34% ± 16% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 15 studies | 37% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 5939.01 | 2623 / 2642 | 99% | 161.30 | 695 / 705 |
adrenal gland | 21% | 351.79 | 54 / 258 | 71% | 87.03 | 164 / 230 |
pancreas | 5% | 30.58 | 18 / 328 | 43% | 10.91 | 76 / 178 |
breast | 0% | 0 | 0 / 459 | 19% | 5.66 | 217 / 1118 |
prostate | 4% | 28.86 | 9 / 245 | 9% | 0.48 | 43 / 502 |
intestine | 6% | 31.14 | 62 / 966 | 3% | 0.35 | 15 / 527 |
kidney | 0% | 0 | 0 / 89 | 7% | 1.03 | 67 / 901 |
stomach | 2% | 7.31 | 6 / 359 | 4% | 0.59 | 12 / 286 |
uterus | 0% | 0 | 0 / 170 | 6% | 1.13 | 26 / 459 |
lung | 0% | 0.91 | 1 / 578 | 5% | 0.93 | 61 / 1155 |
skin | 4% | 21.15 | 72 / 1809 | 1% | 0.30 | 6 / 472 |
ovary | 0% | 0 | 0 / 180 | 5% | 0.73 | 22 / 430 |
bladder | 0% | 0 | 0 / 21 | 4% | 0.68 | 21 / 504 |
eye | 0% | 0 | 0 / 0 | 4% | 0.16 | 3 / 80 |
esophagus | 0% | 0.48 | 2 / 1445 | 3% | 0.17 | 6 / 183 |
thymus | 0% | 0 | 0 / 653 | 3% | 0.33 | 17 / 605 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.19 | 1 / 45 |
heart | 1% | 8.61 | 12 / 861 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 1% | 0.36 | 5 / 406 |
muscle | 0% | 0.77 | 1 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
adipose | 0% | 0 | 0 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 0 | 0 / 1335 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0090036 | Biological process | regulation of protein kinase C signaling |
GO_0060074 | Biological process | synapse maturation |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0043025 | Cellular component | neuronal cell body |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
Gene name | SEZ6L |
Protein name | SEZ6L protein (Seizure related 6 homolog like) Seizure related 6 homolog like Seizure 6-like protein |
Synonyms | UNQ2542/PRO6094 KIAA0927 |
Description | FUNCTION: May contribute to specialized endoplasmic reticulum functions in neurons. . |
Accessions | B0QYH4 ENST00000404234.7 [Q9BYH1-6] ENST00000343706.8 [Q9BYH1-5] ENST00000360929.7 [Q9BYH1-4] B7ZLJ8 Q9BYH1 ENST00000248933.11 [Q9BYH1-1] B0QYH5 ENST00000403121.5 ENST00000402979.1 ENST00000629590.2 [Q9BYH1-7] ENST00000529632.6 |