Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 4 studies | 22% ± 4% | |
GABAergic neuron | 3 studies | 19% ± 1% |
Insufficient scRNA-seq data for expression of SETD6 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 1239.24 | 245 / 245 | 100% | 8.50 | 501 / 502 |
breast | 100% | 1096.98 | 459 / 459 | 99% | 6.63 | 1104 / 1118 |
thymus | 100% | 1560.48 | 653 / 653 | 99% | 6.43 | 597 / 605 |
pancreas | 100% | 1296.46 | 328 / 328 | 98% | 5.10 | 175 / 178 |
ovary | 100% | 925.04 | 180 / 180 | 98% | 6.05 | 422 / 430 |
uterus | 100% | 1048.57 | 170 / 170 | 98% | 6.53 | 450 / 459 |
bladder | 100% | 867.71 | 21 / 21 | 98% | 6.56 | 494 / 504 |
brain | 98% | 798.16 | 2594 / 2642 | 100% | 7.46 | 703 / 705 |
esophagus | 100% | 875.78 | 1445 / 1445 | 98% | 5.86 | 179 / 183 |
intestine | 100% | 816.97 | 966 / 966 | 98% | 6.29 | 514 / 527 |
adrenal gland | 100% | 1235.89 | 258 / 258 | 97% | 5.91 | 222 / 230 |
lung | 99% | 752.53 | 575 / 578 | 96% | 6.27 | 1113 / 1155 |
kidney | 100% | 837.94 | 89 / 89 | 96% | 4.86 | 862 / 901 |
skin | 100% | 1167.14 | 1809 / 1809 | 94% | 5.87 | 446 / 472 |
stomach | 100% | 890.70 | 359 / 359 | 92% | 5.61 | 262 / 286 |
liver | 100% | 610.22 | 226 / 226 | 85% | 3.44 | 347 / 406 |
adipose | 100% | 863.88 | 1204 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 1092.52 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 858.25 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.57 | 1 / 1 |
blood vessel | 100% | 716.54 | 1333 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 4.74 | 44 / 45 |
heart | 98% | 704.32 | 840 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 93% | 5.04 | 74 / 80 |
lymph node | 0% | 0 | 0 / 0 | 83% | 4.50 | 24 / 29 |
peripheral blood | 44% | 253.64 | 406 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0032088 | Biological process | negative regulation of NF-kappaB transcription factor activity |
GO_0048863 | Biological process | stem cell differentiation |
GO_0019827 | Biological process | stem cell population maintenance |
GO_0050727 | Biological process | regulation of inflammatory response |
GO_0018026 | Biological process | peptidyl-lysine monomethylation |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005634 | Cellular component | nucleus |
GO_1904047 | Molecular function | S-adenosyl-L-methionine binding |
GO_0005515 | Molecular function | protein binding |
GO_0016279 | Molecular function | protein-lysine N-methyltransferase activity |
GO_0051059 | Molecular function | NF-kappaB binding |
Gene name | SETD6 |
Protein name | N-lysine methyltransferase SETD6 (EC 2.1.1.-) (SET domain-containing protein 6) N-lysine methyltransferase SETD6 (SET domain-containing protein 6) SET domain containing 6, protein lysine methyltransferase |
Synonyms | |
Description | FUNCTION: Protein-lysine N-methyltransferase. Monomethylates 'Lys-310' of the RELA subunit of NF-kappa-B complex, leading to down-regulation of NF-kappa-B transcription factor activity . Monomethylates 'Lys-8' of H2AZ (H2AZK8me1) . Required for the maintenance of embryonic stem cell self-renewal (By similarity). Methylates PAK4. . |
Accessions | ENST00000219315.9 [Q8TBK2-1] J3QT10 H7C3N0 C9JCR1 ENST00000310682.6 [Q8TBK2-2] ENST00000394266.8 ENST00000422445.5 ENST00000427443.5 Q8TBK2 E9PC53 ENST00000447443.1 |