Insufficient scRNA-seq data for expression of SERF1A at single-cell level.
Insufficient scRNA-seq data for expression of SERF1A at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 83% | 13.84 | 2189 / 2642 | 6% | 0.08 | 41 / 705 |
blood vessel | 79% | 10.75 | 1050 / 1335 | 0% | 0 | 0 / 0 |
thymus | 75% | 8.30 | 488 / 653 | 0% | 0 | 0 / 605 |
lung | 74% | 8.84 | 429 / 578 | 0% | 0.00 | 2 / 1155 |
intestine | 73% | 9.82 | 710 / 966 | 0% | 0 | 0 / 527 |
uterus | 73% | 8.90 | 124 / 170 | 0% | 0.00 | 1 / 459 |
prostate | 69% | 8.88 | 169 / 245 | 1% | 0.01 | 3 / 502 |
breast | 67% | 8.42 | 307 / 459 | 1% | 0.01 | 8 / 1118 |
bladder | 67% | 10.33 | 14 / 21 | 0% | 0.01 | 2 / 504 |
esophagus | 67% | 8.09 | 968 / 1445 | 0% | 0 | 0 / 183 |
kidney | 66% | 7.79 | 59 / 89 | 0% | 0 | 0 / 901 |
ovary | 65% | 7.16 | 117 / 180 | 1% | 0.01 | 4 / 430 |
muscle | 64% | 8.12 | 515 / 803 | 0% | 0 | 0 / 0 |
adrenal gland | 64% | 6.47 | 164 / 258 | 0% | 0.00 | 1 / 230 |
adipose | 62% | 6.73 | 743 / 1204 | 0% | 0 | 0 / 0 |
heart | 60% | 5.59 | 520 / 861 | 0% | 0 | 0 / 0 |
spleen | 60% | 7.83 | 145 / 241 | 0% | 0 | 0 / 0 |
skin | 57% | 5.50 | 1029 / 1809 | 0% | 0 | 0 / 472 |
stomach | 53% | 5.02 | 190 / 359 | 0% | 0 | 0 / 286 |
pancreas | 43% | 3.06 | 140 / 328 | 0% | 0 | 0 / 178 |
peripheral blood | 33% | 2.55 | 308 / 929 | 0% | 0 | 0 / 0 |
liver | 29% | 1.62 | 66 / 226 | 0% | 0 | 0 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_1990000 | Biological process | amyloid fibril formation |
GO_0031648 | Biological process | protein destabilization |
GO_0007399 | Biological process | nervous system development |
GO_0032991 | Cellular component | protein-containing complex |
GO_0005829 | Cellular component | cytosol |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | SERF1A |
Protein name | Small EDRK-rich factor 1 Small EDRK-rich factor 1 (Small EDRK-rich factor 1B) Small EDRK-rich factor 1 (Protein 4F5) (h4F5) (SMA modifier 1) |
Synonyms | SERF1 SMAM1 FAM2B SMAM1; FAM2A SERF1B |
Description | FUNCTION: Positive regulator of amyloid protein aggregation and proteotoxicity . Induces conformational changes in amyloid proteins, such as APP, HTT, and SNCA, driving them into compact formations preceding the formation of aggregates . . |
Accessions | ENST00000380750.8 [O75920-1] ENST00000515588.1 ENST00000611277.1 ENST00000354833.7 [O75920-1] ENST00000622553.4 [O75920-1] ENST00000622047.1 ENST00000613172.4 [O75920-1] ENST00000626049.1 ENST00000380751.10 [O75920-2] ENST00000611616.4 [O75920-2] ENST00000614527.4 [O75920-1] E5RIQ9 ENST00000614310.2 ENST00000317633.14 [O75920-2] ENST00000512649.1 ENST00000630567.1 [O75920-1] ENST00000503931.5 ENST00000611952.1 ENST00000629958.2 ENST00000630603.2 ENST00000621283.3 [O75920-2] ENST00000630348.1 ENST00000628126.2 D6RC42 O75920 ENST00000507348.5 ENST00000504458.1 D6RCL9 ENST00000613176.4 ENST00000627372.2 [O75920-2] ENST00000628888.2 |