Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 4 studies | 21% ± 2% | |
epithelial cell | 3 studies | 22% ± 5% | |
GABAergic neuron | 3 studies | 31% ± 5% | |
glutamatergic neuron | 3 studies | 41% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 29% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1240.74 | 1445 / 1445 | 100% | 4.71 | 183 / 183 |
pancreas | 100% | 1037.58 | 328 / 328 | 100% | 4.31 | 178 / 178 |
prostate | 100% | 706.36 | 245 / 245 | 99% | 4.08 | 499 / 502 |
lung | 100% | 700.20 | 577 / 578 | 99% | 3.61 | 1144 / 1155 |
breast | 100% | 668.45 | 458 / 459 | 99% | 4.44 | 1107 / 1118 |
brain | 99% | 809.09 | 2615 / 2642 | 100% | 4.88 | 703 / 705 |
intestine | 100% | 732.82 | 966 / 966 | 99% | 3.63 | 520 / 527 |
stomach | 100% | 680.13 | 359 / 359 | 98% | 3.89 | 281 / 286 |
bladder | 100% | 674.19 | 21 / 21 | 98% | 3.38 | 494 / 504 |
uterus | 100% | 737.34 | 170 / 170 | 97% | 3.44 | 445 / 459 |
thymus | 100% | 838.79 | 653 / 653 | 96% | 4.38 | 582 / 605 |
adrenal gland | 100% | 1528.50 | 258 / 258 | 95% | 3.87 | 219 / 230 |
skin | 100% | 969.39 | 1809 / 1809 | 92% | 3.23 | 433 / 472 |
ovary | 100% | 600.98 | 180 / 180 | 91% | 2.58 | 391 / 430 |
kidney | 100% | 535.17 | 89 / 89 | 89% | 2.43 | 804 / 901 |
liver | 95% | 303.07 | 215 / 226 | 70% | 1.60 | 286 / 406 |
blood vessel | 100% | 1396.15 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 654.99 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 543.07 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.50 | 1 / 1 |
adipose | 100% | 579.59 | 1203 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 2.97 | 42 / 45 |
heart | 90% | 338.51 | 775 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 74% | 238.18 | 686 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 62% | 1.00 | 18 / 29 |
eye | 0% | 0 | 0 / 0 | 53% | 0.99 | 42 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008654 | Biological process | phospholipid biosynthetic process |
GO_0030198 | Biological process | extracellular matrix organization |
GO_0032367 | Biological process | intracellular cholesterol transport |
GO_0036148 | Biological process | phosphatidylglycerol acyl-chain remodeling |
GO_0044233 | Cellular component | mitochondria-associated endoplasmic reticulum membrane contact site |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0031012 | Cellular component | extracellular matrix |
GO_0016020 | Cellular component | membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0003674 | Molecular function | molecular_function |
Gene name | SERAC1 |
Protein name | Protein SERAC1 (Serine active site-containing protein 1) Serine active site containing 1 |
Synonyms | |
Description | FUNCTION: Plays an important role in the phosphatidylglycerol remodeling that is essential for both mitochondrial function and intracellular cholesterol trafficking. May catalyze the remodeling of phosphatidylglycerol and be involved in the transacylation-acylation reaction to produce phosphatidylglycerol-36:1. May be involved in bis(monoacylglycerol)phosphate biosynthetic pathway. . FUNCTION: Plays an important role in the phosphatidylglycerol remodeling that is essential for both mitochondrial function and intracellular cholesterol trafficking. May catalyze the remodeling of phosphatidylglycerol and be involved in the transacylation-acylation reaction to produce phosphatidylglycerol-36:1. May be involved in bis(monoacylglycerol)phosphate biosynthetic pathway. . FUNCTION: Plays an important role in the phosphatidylglycerol remodeling that is essential for both mitochondrial function and intracellular cholesterol trafficking. May catalyze the remodeling of phosphatidylglycerol and be involved in the transacylation-acylation reaction to produce phosphatidylglycerol-36:1. May be involved in bis(monoacylglycerol)phosphate biosynthetic pathway. . FUNCTION: Plays an important role in the phosphatidylglycerol remodeling that is essential for both mitochondrial function and intracellular cholesterol trafficking. May catalyze the remodeling of phosphatidylglycerol and be involved in the transacylation-acylation reaction to produce phosphatidylglycerol-36:1. May be involved in bis(monoacylglycerol)phosphate biosynthetic pathway. . FUNCTION: Plays an important role in the phosphatidylglycerol remodeling that is essential for both mitochondrial function and intracellular cholesterol trafficking. May catalyze the remodeling of phosphatidylglycerol and be involved in the transacylation-acylation reaction to produce phosphatidylglycerol-36:1. May be involved in bis(monoacylglycerol)phosphate biosynthetic pathway. . FUNCTION: Plays an important role in the phosphatidylglycerol remodeling that is essential for both mitochondrial function and intracellular cholesterol trafficking. May catalyze the remodeling of phosphatidylglycerol and be involved in the transacylation-acylation reaction to produce phosphatidylglycerol-36:1. May be involved in bis(monoacylglycerol)phosphate biosynthetic pathway. . FUNCTION: Plays an important role in the phosphatidylglycerol remodeling that is essential for both mitochondrial function and intracellular cholesterol trafficking. May catalyze the remodeling of phosphatidylglycerol and be involved in the transacylation-acylation reaction to produce phosphatidylglycerol-36:1. May be involved in bis(monoacylglycerol)phosphate biosynthetic pathway. . |
Accessions | ENST00000645172.1 ENST00000647468.2 [Q96JX3-1] ENST00000607071.6 A0A2R8Y3S0 A0A2R8Y511 ENST00000435180.6 A0A3B3ISE8 U3KQE4 ENST00000644972.1 ENST00000646562.1 Q96JX3 ENST00000646410.1 ENST00000607742.5 A0A2R8YFH3 Q5JVM6 ENST00000606965.5 ENST00000642903.1 ENST00000642244.1 ENST00000648111.1 A0A2R8YCL0 ENST00000367101.5 [Q96JX3-2] ENST00000646208.1 U3KQG3 ENST00000645077.1 A0A2R8YD19 |